RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 GSNP06396 782 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 CCNCP24863 283 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 SLC10A7Q0GE19 358 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 ILF2Q12905 390 aaKnown RBP14.5□□□□□ -0.09
COL6A2-201ENST00000300527 KANK2Q63ZY3 851 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 TWF2Q6IBS0 349 aaKnown RBP14.5□□□□□ -0.09
COL6A2-201ENST00000300527 HID1Q8IV36 788 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 FAM83FQ8NEG4 500 aaPredicted RBP14.5□□□□□ -0.09
COL6A2-201ENST00000300527 GIPC2Q8TF65 315 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 L3HYPDHQ96EM0 354 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 DMRTB1Q96MA1 342 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 SLC9A7Q96T83 725 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 PCDHGA3Q9Y5H0 932 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 ADM5C9JUS6 153 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 H0Y626 953 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 PIRO00625 290 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 FAM20BO75063 409 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 TRIM16O95361 564 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 G6PDP11413 515 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 DNAJB2P25686 324 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 CD40LGP29965 261 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 RCAN2Q14206 197 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 ZNF549Q6P9A3 640 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 VASH1Q7L8A9 365 aaPredicted RBP14.5□□□□□ -0.09
COL6A2-201ENST00000300527 AURKBQ96GD4 344 aaPredicted RBP14.5□□□□□ -0.09
COL6A2-201ENST00000300527 B3GALT6Q96L58 329 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 NFKBIZQ9BYH8 718 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 ELP3Q9H9T3 547 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 SP110Q9HB58 689 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 ZFP14Q9HCL3 533 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 C8orf4Q9NR00 106 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 AIG1Q9NVV5 245 aa14.5□□□□□ -0.09
COL6A2-201ENST00000300527 TAF4O00268 1085 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 ECI2O75521 394 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 PGLSO95336 258 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 ZNF682O95780 498 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 MT-ND2P03891 347 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 KRT8P05787 483 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 SPNP16150 400 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 HTR6P50406 440 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 BCL2A1Q16548 175 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 AHSA2Q719I0 299 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 ARMCX6Q7L4S7 300 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 TMEM179BQ7Z7N9 219 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 C14orf80Q86SX3 495 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 ZMIZ2Q8NF64 920 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 SENP8Q96LD8 212 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 PRMT5O14744 637 aaPredicted RBP14.49□□□□□ -0.09
COL6A2-201ENST00000300527 TNPO2O14787 897 aaKnown RBP14.49□□□□□ -0.09
COL6A2-201ENST00000300527 FFAR3O14843 346 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 GPR42O15529 346 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 F9P00740 461 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 LCKP06239 509 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 CNPP09543 421 aaKnown RBP14.49□□□□□ -0.09
COL6A2-201ENST00000300527 MTHFD2P13995 350 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 PFKLP17858 780 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 EPS8Q12929 822 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 VGLL4Q14135 290 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 GTDC1Q4AE62 458 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 INTS6LQ5JSJ4 861 aaKnown RBP14.49□□□□□ -0.09
COL6A2-201ENST00000300527 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL6A2-201ENST00000300527 EID3Q8N140 333 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 MFSD4AQ8N468 514 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 FAR1Q8WVX9 515 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 CYP2S1Q96SQ9 504 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 CGREF1Q99674 301 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 MAGEE1Q9HCI5 957 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 POLR3BQ9NW08 1133 aaPredicted RBP14.49□□□□□ -0.09
COL6A2-201ENST00000300527 IKZF3Q9UKT9 509 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 PMF1-BGLAPU3KQ54 211 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 CCDC162PA2VCL2 907 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 MEIS3P2A8K0S8 358 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 CD3EAPO15446 510 aaKnown RBP14.49□□□□□ -0.09
COL6A2-201ENST00000300527 RECQL5O94762 991 aaPredicted RBP14.49□□□□□ -0.09
COL6A2-201ENST00000300527 MATN4O95460 622 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 DNAJB1P25685 340 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 HTR1EP28566 365 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 ST13P50502 369 aaKnown RBP14.49□□□□□ -0.09
COL6A2-201ENST00000300527 ZBTB6Q15916 424 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 SLC22A15Q8IZD6 547 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 OR52B6Q8NGF0 335 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 OR6Q1Q8NGQ2 317 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 METTL6Q8TCB7 284 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 UBE2FQ969M7 185 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 C3orf18Q9UK00 162 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 BOLA1Q9Y3E2 137 aa14.49□□□□□ -0.09
COL6A2-201ENST00000300527 EEDO75530 441 aaKnown RBP14.48□□□□□ -0.09
COL6A2-201ENST00000300527 CCNKO75909 580 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 HMBSP08397 361 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 SLC2A4P14672 509 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 ADRA1AP35348 466 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 ALDH7A1P49419 539 aaKnown RBP14.48□□□□□ -0.09
COL6A2-201ENST00000300527 CRY1Q16526 586 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 C18orf21Q32NC0 220 aaPredicted RBP14.48□□□□□ -0.09
COL6A2-201ENST00000300527 LRRC8DQ7L1W4 858 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 GALNT10Q86SR1 603 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 CNDP2Q96KP4 475 aaKnown RBP14.48□□□□□ -0.09
COL6A2-201ENST00000300527 UGT2B28Q9BY64 529 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 TRIT1Q9H3H1 467 aaKnown RBP14.48□□□□□ -0.09
COL6A2-201ENST00000300527 SCUBE2Q9NQ36 999 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms