RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 VPS50Q96JG6 964 aa13.44□□□□□ -0.26
CDH8-201ENST00000299345 ZNF597Q96LX8 424 aa13.44□□□□□ -0.26
CDH8-201ENST00000299345 PPM1MQ96MI6 270 aa13.44□□□□□ -0.26
CDH8-201ENST00000299345 ZNF558Q96NG5 402 aa13.44□□□□□ -0.26
CDH8-201ENST00000299345 TMEM74Q96NL1 305 aa13.44□□□□□ -0.26
CDH8-201ENST00000299345 OPTCQ9UBM4 332 aa13.44□□□□□ -0.26
CDH8-201ENST00000299345 PCDHGB4Q9UN71 923 aa13.44□□□□□ -0.26
CDH8-201ENST00000299345 PCDHGB5Q9Y5G0 923 aa13.44□□□□□ -0.26
CDH8-201ENST00000299345 FAM234BA2RU67 622 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 PDLIM1O00151 329 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 TFAP2AP05549 437 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 SPATA31D3P0C874 917 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 UGT1A1P22309 533 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 UGT1A4P22310 534 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 NFKBIAP25963 317 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 UGT1A3P35503 534 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 UGT1A5P35504 534 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 PPP3CCP48454 512 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 ERVPABLB-1P60509 514 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 DEFB115Q30KQ5 88 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 ZNF783Q6ZMS7 281 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 SPATA31D4Q6ZUB0 917 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 PHYKPLQ8IUZ5 450 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 HIC2Q96JB3 615 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 RNF145Q96MT1 663 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 GPATCH1Q9BRR8 931 aaKnown RBP13.43□□□□□ -0.26
CDH8-201ENST00000299345 MAGEE1Q9HCI5 957 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 ARMC1Q9NVT9 282 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 ZIM2Q9NZV7 527 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.43□□□□□ -0.26
CDH8-201ENST00000299345 HTRA2O43464 458 aaPredicted RBP13.43□□□□□ -0.26
CDH8-201ENST00000299345 LDLRP01130 860 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 ZNF23P17027 643 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 PIK3CGP48736 1102 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 HK3P52790 923 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 ARHGEF7Q14155 803 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 ITIH5Q86UX2 942 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 CENPNQ96H22 339 aaPredicted RBP13.43□□□□□ -0.26
CDH8-201ENST00000299345 C17orf80Q9BSJ5 609 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 THUMPD3Q9BV44 507 aaKnown RBP13.43□□□□□ -0.26
CDH8-201ENST00000299345 NSUN3Q9H649 340 aaKnown RBP13.43□□□□□ -0.26
CDH8-201ENST00000299345 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.43□□□□□ -0.26
CDH8-201ENST00000299345 POLR3HQ9Y535 204 aaPredicted RBP13.43□□□□□ -0.26
CDH8-201ENST00000299345 PGLSO95336 258 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 IGSF6O95976 241 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 RCAN2Q14206 197 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 PAGE3Q5JUK9 113 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 GOLGA7Q7Z5G4 137 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 RALGPS2Q86X27 583 aaPredicted RBP13.43□□□□□ -0.26
CDH8-201ENST00000299345 TMEM199Q8N511 208 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 OR4F6Q8NGB9 312 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 AUTS2Q8WXX7 1259 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 TNKS2Q9H2K2 1166 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 MUC13Q9H3R2 512 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 ATP13A3Q9H7F0 1226 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 LHX3Q9UBR4 397 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 KLQ9UEF7 1012 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 DOCK4Q8N1I0 1966 aa13.43□□□□□ -0.26
CDH8-201ENST00000299345 GLYATL1P3A0A0U1RQE8 302 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 E2F3O00716 465 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 H6PDO95479 791 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 MT-ND1P03886 318 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 SMIM18P0DKX4 95 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 PIM1P11309 404 aaPredicted RBP13.42□□□□□ -0.26
CDH8-201ENST00000299345 GKP32189 559 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 APLP1P51693 650 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 RPL38P63173 70 aaKnown RBP13.42□□□□□ -0.26
CDH8-201ENST00000299345 C18orf21Q32NC0 220 aaPredicted RBP13.42□□□□□ -0.26
CDH8-201ENST00000299345 PDCD4Q53EL6 469 aaKnown RBP13.42□□□□□ -0.26
CDH8-201ENST00000299345 LCN8Q6JVE9 175 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 B3GNT6Q6ZMB0 384 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.42□□□□□ -0.26
CDH8-201ENST00000299345 ANKFN1Q8N957 763 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 DCAF4L2Q8NA75 395 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 TRPV3Q8NET8 790 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 MRPL17Q9NRX2 175 aaKnown RBP13.42□□□□□ -0.26
CDH8-201ENST00000299345 ABCD2Q9UBJ2 740 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 ANKRD12Q6UB98 2062 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 FXYD1O00168 92 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 TSPAN12O95859 305 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 F11P03951 625 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 SOD2P04179 222 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 BMP2P12643 396 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 SERPINA4P29622 427 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 AKT1P31749 480 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 MAPK8P45983 427 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 PPP4R4Q6NUP7 873 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 LETMD1Q6P1Q0 360 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 SLC2A7Q6PXP3 512 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 SNX20Q7Z614 316 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 TEX37Q96LM6 180 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 PPP3R2Q96LZ3 170 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 MYLKQ15746 1914 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 RGS14O43566 566 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 CLDN7O95471 211 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 PRAMEF12O95522 483 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 GABRR2P28476 465 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 HTR6P50406 440 aa13.42□□□□□ -0.26
CDH8-201ENST00000299345 EEFSECP57772 596 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms