RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PTPRNQ16849 979 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 ZNF697Q5TEC3 545 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 PLPP4Q5VZY2 271 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 LINGO2Q7L985 606 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 TMPRSS11BQ86T26 416 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 PRMT8Q9NR22 394 aaPredicted RBP11.96□□□□□ -0.5
PCF11-201ENST00000298281 BORCS7-ASMTA0A0B4J1R7 106 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 C9J4A7 227 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 MRPS6P82932 125 aaKnown RBP11.96□□□□□ -0.5
PCF11-201ENST00000298281 GRIK2Q13002 908 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 NOMO2Q5JPE7 1267 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 ZCCHC23Q6ZST2 131 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 KCT2Q8NC54 265 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 EPS8L1Q8TE68 723 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 BORCS7Q96B45 105 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 PANX1Q96RD7 426 aa11.96□□□□□ -0.5
PCF11-201ENST00000298281 SDK1Q7Z5N4 2213 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 CDH3P22223 829 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 GRIA4P48058 902 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 ENTPD1P49961 510 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 ERVK-21P61565 698 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 MAMLD1Q13495 774 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 UBXN2BQ14CS0 331 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 SNAPC1Q16533 368 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 LRRC52Q8N7C0 313 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 FAM13CQ8NE31 585 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 PRCCQ92733 491 aaPredicted RBP11.95□□□□□ -0.5
PCF11-201ENST00000298281 BCAS3Q9H6U6 928 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 TMLHEQ9NVH6 421 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 RUVBL1Q9Y265 456 aaKnown RBP11.95□□□□□ -0.5
PCF11-201ENST00000298281 ASXL3Q9C0F0 2248 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 BTNL10A8MVZ5 291 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 PEX12O00623 359 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 LAMP2P13473 410 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 IFI35P80217 286 aaPredicted RBP11.95□□□□□ -0.5
PCF11-201ENST00000298281 WSCD1Q658N2 575 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 DUPD1Q68J44 220 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 SMARCD3Q6STE5 483 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 YTHDF3Q7Z739 585 aaKnown RBP11.95□□□□□ -0.5
PCF11-201ENST00000298281 SLC9A9Q8IVB4 645 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 CEP97Q8IW35 865 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 SMARCD2Q92925 531 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 COPS8Q99627 209 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 GDAP2Q9NXN4 497 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 F8VP50 259 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 PIP5K1CO60331 668 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 USP12O75317 370 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 APODP05090 189 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 CYP1A2P05177 515 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 CD40LGP29965 261 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 ZC3H12AQ5D1E8 599 aaKnown RBP11.95□□□□□ -0.5
PCF11-201ENST00000298281 CPA6Q8N4T0 437 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 LSM14AQ8ND56 463 aaKnown RBP11.95□□□□□ -0.5
PCF11-201ENST00000298281 OR14C36Q8NHC7 312 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 ADAMTS15Q8TE58 950 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 POF1BQ8WVV4 589 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 P2RX7Q99572 595 aaKnown RBP11.95□□□□□ -0.5
PCF11-201ENST00000298281 SEMA3CQ99985 751 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 BBIP1A8MTZ0 92 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 RFXANKO14593 260 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 UBXN7O94888 489 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 GRK6P43250 576 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 PKNOX1P55347 436 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 SOX10P56693 466 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 KCNJ9Q92806 393 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 SLC47A1Q96FL8 570 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 AARSD1Q9BTE6 412 aaKnown RBP11.95□□□□□ -0.5
PCF11-201ENST00000298281 WDR12Q9GZL7 423 aaKnown RBP11.95□□□□□ -0.5
PCF11-201ENST00000298281 TTYH1Q9H313 450 aaPredicted RBP11.95□□□□□ -0.5
PCF11-201ENST00000298281 HMGXB4Q9UGU5 601 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 RAPGEFL1Q9UHV5 662 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 TRAFD1O14545 582 aaPredicted RBP11.95□□□□□ -0.5
PCF11-201ENST00000298281 TNFRSF10BO14763 440 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 LRIG2O94898 1065 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 C22orf31O95567 290 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 CDC25CP30307 473 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 ARHGAP22Q7Z5H3 698 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 SAT2Q96F10 170 aaPredicted RBP11.95□□□□□ -0.5
PCF11-201ENST00000298281 UCK2Q9BZX2 261 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 OSBPL2Q9H1P3 480 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 CRTAC1Q9NQ79 661 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 NWD1Q149M9 1564 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 LOC100509620A0A075B734 347 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 A0A0G2JMP0 313 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 A0A1B0GVC2 190 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 CLN5O75503 358 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 FGBP02675 491 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 RHEBQ15382 184 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 HECTD2Q5U5R9 776 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 DCLRE1AQ6PJP8 1040 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 PLPPR4Q7Z2D5 763 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 OR4M2Q8NGB6 313 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 SCGB1C1Q8TD33 95 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 PPCDCQ96CD2 204 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 LRMDAQ9H2I8 198 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 ZNF175Q9Y473 711 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 PCDHB3Q9Y5E6 796 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 FKBP7Q9Y680 259 aa11.95□□□□□ -0.5
PCF11-201ENST00000298281 TBX1O43435 398 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 SERPINA6P08185 405 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms