RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 PSMD8P48556 350 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 BCL2L1Q07817 233 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 NFATC2Q13469 925 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 RFTN2Q52LD8 501 aaPredicted RBP11.62□□□□□ -0.55
RHO-201ENST00000296271 XKR7Q5GH72 579 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 C6orf136Q5SQH8 315 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 CROCCQ5TZA2 2017 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 CNKSR3Q6P9H4 555 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 IL27RAQ6UWB1 636 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 DET1Q7L5Y6 550 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 RALGPS2Q86X27 583 aaPredicted RBP11.62□□□□□ -0.55
RHO-201ENST00000296271 DHFR2Q86XF0 187 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 KIAA2013Q8IYS2 634 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 DCAF4L2Q8NA75 395 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 FNDC5Q8NAU1 212 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 METTL6Q8TCB7 284 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 EME1Q96AY2 570 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 PPWD1Q96BP3 646 aaKnown RBP11.62□□□□□ -0.55
RHO-201ENST00000296271 MTFMTQ96DP5 389 aaKnown RBP11.62□□□□□ -0.55
RHO-201ENST00000296271 FAM8A1Q9UBU6 413 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 DHRS7Q9Y394 339 aa11.62□□□□□ -0.55
RHO-201ENST00000296271 NUP214P35658 2090 aaPredicted RBP11.61□□□□□ -0.55
RHO-201ENST00000296271 TCRBV3S1A0A5B6 114 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 SAC3D1A6NKF1 404 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 H7C0S8 307 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 SYNCRIPO60506 623 aaKnown RBP11.61□□□□□ -0.55
RHO-201ENST00000296271 RFPL2O75678 378 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 ESR1P03372 595 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 PRR35P0CG20 571 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 SMIM18P0DKX4 95 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 POLE2P56282 527 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 SELPLGQ14242 412 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 FRA10AC1Q70Z53 315 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 TMEM25Q86YD3 366 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 TMC8Q8IU68 726 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 FIBCD1Q8N539 461 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 PIP4K2CQ8TBX8 421 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 PROKR1Q8TCW9 393 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 LRRC3Q9BY71 257 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 CLPBQ9H078 707 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 VCX3BQ9H321 246 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 ACTL8Q9H568 366 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 MAGEE1Q9HCI5 957 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 AIG1Q9NVV5 245 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 SOCS2O14508 198 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 STX16O14662 325 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 FFAR2O15552 330 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 OLFM2O95897 454 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 GNRH1P01148 92 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 UROSP10746 265 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 G6PDP11413 515 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 LHCGRP22888 699 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 CHN2P52757 468 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 WDR5P61964 334 aaKnown RBP11.61□□□□□ -0.55
RHO-201ENST00000296271 HMGCS1Q01581 520 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 MTA1Q13330 715 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 NFYCQ13952 458 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 ZXDCQ2QGD7 858 aaPredicted RBP11.61□□□□□ -0.55
RHO-201ENST00000296271 PLEKHG6Q3KR16 790 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 POM121L1PQ3SYA9 428 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 SAMD4BQ5PRF9 694 aaKnown RBP11.61□□□□□ -0.55
RHO-201ENST00000296271 ZFP1Q6P2D0 407 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 CHST14Q8NCH0 376 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 OR56A4Q8NGH8 313 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 SORCS1Q8WY21 1168 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 GBP5Q96PP8 586 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 HERC2P3Q9BVR0 1158 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 LINC00597Q9H2U6 94 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 IPPKQ9H8X2 491 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 CIDEBQ9UHD4 219 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 ZNHIT2Q9UHR6 403 aa11.61□□□□□ -0.55
RHO-201ENST00000296271 ARHGAP10A1A4S6 786 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 TRIM43BA6NCK2 446 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 LEFTY2O00292 366 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 AKAP10O43572 662 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 B3GALT4O96024 378 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 SRCP12931 536 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 ATP4BP51164 291 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 CLCN4P51793 760 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 ZNF648Q5T619 568 aaPredicted RBP11.6□□□□□ -0.55
RHO-201ENST00000296271 LRRC66Q68CR7 880 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 NAIF1Q69YI7 327 aaPredicted RBP11.6□□□□□ -0.55
RHO-201ENST00000296271 CRTC1Q6UUV9 634 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 TRIM43Q96BQ3 446 aaPredicted RBP11.6□□□□□ -0.55
RHO-201ENST00000296271 ASB2Q96Q27 587 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 YME1L1Q96TA2 773 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 C2orf49Q9BVC5 232 aaPredicted RBP11.6□□□□□ -0.55
RHO-201ENST00000296271 EPS15L1Q9UBC2 864 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 SH3BP1Q9Y3L3 701 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 SCN8AQ9UQD0 1980 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 GLYATL1P3A0A0U1RQE8 302 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 HIDE1A8MVS5 230 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 LILRB3O75022 631 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 FGF18O76093 207 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 B4GALNT1Q00973 533 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 GTF2H2Q13888 395 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 PTGR1Q14914 329 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 LRRC26Q2I0M4 334 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 MAP7D1Q3KQU3 841 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 ATP13A5Q4VNC0 1218 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms