RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ETS1P14921 441 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 ITGALP20701 1170 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 ADRA1AP35348 466 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 FASLGP48023 281 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 GFERP55789 205 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 CCZ1BP86790 482 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 CCZ1P86791 482 aaPredicted RBP9.61□□□□□ -0.87
CCDC58-201ENST00000291458 ZFP36L1Q07352 338 aaKnown RBP9.61□□□□□ -0.87
CCDC58-201ENST00000291458 EIF3IQ13347 325 aaKnown RBP9.61□□□□□ -0.87
CCDC58-201ENST00000291458 KLF1Q13351 362 aaPredicted RBP9.61□□□□□ -0.87
CCDC58-201ENST00000291458 NFE2L1Q14494 772 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 NR1D2Q14995 579 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 RPS6KA1Q15418 735 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 CCDC38Q502W7 563 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 LDLRAP1Q5SW96 308 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.61□□□□□ -0.87
CCDC58-201ENST00000291458 TMEM220Q6QAJ8 160 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 FAM83HQ6ZRV2 1179 aaPredicted RBP9.61□□□□□ -0.87
CCDC58-201ENST00000291458 DDHD1Q8NEL9 900 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 GPR150Q8NGU9 434 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 ZNF398Q8TD17 642 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 ZNF592Q92610 1267 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 ART4Q93070 314 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 LRRC45Q96CN5 670 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 GRAMD1AQ96CP6 724 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 VPS35Q96QK1 796 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 CTRCQ99895 268 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 TIMM29Q9BSF4 260 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 ASB8Q9H765 288 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 SARS2Q9NP81 518 aaKnown RBP9.61□□□□□ -0.87
CCDC58-201ENST00000291458 CPNE7Q9UBL6 633 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 FAM208BQ5VWN6 2430 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 PTPRQQ9UMZ3 2332 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 KIR2DS5A0A0G2JLQ3 304 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 A0A0G2JNG1 304 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 C5orf60A6NFR6 353 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 OR51F1A6NGY5 319 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 EIF4E1BA6NMX2 242 aaKnown RBP9.6□□□□□ -0.87
CCDC58-201ENST00000291458 E7EVH7 732 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 KIR2DS3K7RE56 304 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 CHUKO15111 745 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 LIASO43766 372 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 NRDCO43847 1150 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 POP7O75817 140 aaKnown RBP9.6□□□□□ -0.87
CCDC58-201ENST00000291458 SRP72O76094 671 aaKnown RBP9.6□□□□□ -0.87
CCDC58-201ENST00000291458 CRTAMO95727 393 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 PRB1P04280 392 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 AMD1P17707 334 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 VCLP18206 1134 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 IDSP22304 550 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 MC4RP32245 332 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 CXCR5P32302 372 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 CSTF2P33240 577 aaKnown RBP eCLIP9.6□□□□□ -0.87
CCDC58-201ENST00000291458 GPR3P46089 330 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 CDKN1CP49918 316 aaPredicted RBP9.6□□□□□ -0.87
CCDC58-201ENST00000291458 CLCNKAP51800 687 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 ZNF140P52738 457 aaPredicted RBP9.6□□□□□ -0.87
CCDC58-201ENST00000291458 LIMK2P53671 638 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 TMPRSS3P57727 454 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 GPLD1P80108 840 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 CLN3Q13286 438 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 KIR2DS5Q14953 304 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 PLCL1Q15111 1095 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 P3H1Q32P28 736 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 KIAA1614Q5VZ46 1190 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 ZDHHC20Q5W0Z9 365 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 RANBP10Q6VN20 620 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 PPP1R21Q6ZMI0 780 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 TAS2R42Q7RTR8 314 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 CLEC14AQ86T13 490 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 AMZ2Q86W34 360 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 SLC13A5Q86YT5 568 aaPredicted RBP9.6□□□□□ -0.87
CCDC58-201ENST00000291458 LRRC8AQ8IWT6 810 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 RNF10Q8N5U6 811 aaKnown RBP9.6□□□□□ -0.87
CCDC58-201ENST00000291458 CCDC89Q8N998 374 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 DNAAF3Q8N9W5 541 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 OR4D9Q8NGE8 314 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 OR52K1Q8NGK4 314 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 SLC35B2Q8TB61 432 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 RSC1A1Q92681 617 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 SGF29Q96ES7 293 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 DCUN1D1Q96GG9 259 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 TGM7Q96PF1 710 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 BBC3Q96PG8 261 aaPredicted RBP9.6□□□□□ -0.87
CCDC58-201ENST00000291458 LRRC40Q9H9A6 602 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 IMP3Q9NV31 184 aaKnown RBP9.6□□□□□ -0.87
CCDC58-201ENST00000291458 OCIAD1Q9NX40 245 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 ZNF624Q9P2J8 865 aaPredicted RBP9.6□□□□□ -0.87
CCDC58-201ENST00000291458 ZNF148Q9UQR1 794 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 WDR37Q9Y2I8 494 aa9.6□□□□□ -0.87
CCDC58-201ENST00000291458 PIKFYVEQ9Y2I7 2098 aa9.59□□□□□ -0.87
CCDC58-201ENST00000291458 ASPMQ8IZT6 3477 aa9.59□□□□□ -0.87
CCDC58-201ENST00000291458 GPR89AB7ZAQ6 455 aa9.59□□□□□ -0.87
CCDC58-201ENST00000291458 C9orf172C9J069 976 aa9.59□□□□□ -0.87
CCDC58-201ENST00000291458 CEP104O60308 925 aa9.59□□□□□ -0.87
CCDC58-201ENST00000291458 RASSF9O75901 435 aa9.59□□□□□ -0.87
CCDC58-201ENST00000291458 AVPP01185 164 aa9.59□□□□□ -0.87
CCDC58-201ENST00000291458 POLBP06746 335 aa9.59□□□□□ -0.87
CCDC58-201ENST00000291458 ZSCAN5DPP0CG00 497 aa9.59□□□□□ -0.87
CCDC58-201ENST00000291458 GPR89BP0CG08 455 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms