RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 GLIS1Q8NBF1 620 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 SH3KBP1Q96B97 665 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 SGF29Q96ES7 293 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 AHCYL2Q96HN2 611 aaKnown RBP14.17□□□□□ -0.14
HMGN3-201ENST00000275036 DNAJC1Q96KC8 554 aaKnown RBP14.17□□□□□ -0.14
HMGN3-201ENST00000275036 STN1Q9H668 368 aaKnown RBP14.17□□□□□ -0.14
HMGN3-201ENST00000275036 ASB8Q9H765 288 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 LRRC40Q9H9A6 602 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 WASH6PQ9NQA3 447 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.17□□□□□ -0.14
HMGN3-201ENST00000275036 OGFRQ9NZT2 677 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 SLC30A1Q9Y6M5 507 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 PIEZO2Q9H5I5 2752 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 LILRA5A6NI73 299 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 TK2O00142 265 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 PRSS56P0CW18 603 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 ETS1P14921 441 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 IDSP22304 550 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 MAPK9P45984 424 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 CDKN1CP49918 316 aaPredicted RBP14.16□□□□□ -0.14
HMGN3-201ENST00000275036 RHDQ02161 417 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 DMPKQ09013 629 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 SNX1Q13596 522 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 NFE2L1Q14494 772 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 P3H1Q32P28 736 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 AGAP9Q5VTM2 703 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 WDR74Q6RFH5 385 aaPredicted RBP14.16□□□□□ -0.14
HMGN3-201ENST00000275036 TMEM26Q6ZUK4 368 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 ARHGAP22Q7Z5H3 698 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 AMZ2Q86W34 360 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 LSM14AQ8ND56 463 aaKnown RBP14.16□□□□□ -0.14
HMGN3-201ENST00000275036 JPH3Q8WXH2 748 aaPredicted RBP14.16□□□□□ -0.14
HMGN3-201ENST00000275036 NCSTNQ92542 709 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 ART4Q93070 314 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 DPYSL5Q9BPU6 564 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 TLR10Q9BXR5 811 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.16□□□□□ -0.14
HMGN3-201ENST00000275036 ZCCHC2Q9C0B9 1178 aaKnown RBP14.16□□□□□ -0.14
HMGN3-201ENST00000275036 FAM96AQ9H5X1 160 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 UCK1Q9HA47 277 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 WDR70Q9NW82 654 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 FEZ2Q9UHY8 353 aaPredicted RBP14.16□□□□□ -0.14
HMGN3-201ENST00000275036 B3GALT1Q9Y5Z6 326 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 BSNQ9UPA5 3926 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 BOD1L1Q8NFC6 3051 aa14.16□□□□□ -0.14
HMGN3-201ENST00000275036 A8MU76 341 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.15□□□□□ -0.14
HMGN3-201ENST00000275036 VIPP01282 170 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 MSH3P20585 1137 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 PBLDP30039 288 aaPredicted RBP14.15□□□□□ -0.14
HMGN3-201ENST00000275036 AKT1P31749 480 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 STIP1P31948 543 aaKnown RBP14.15□□□□□ -0.14
HMGN3-201ENST00000275036 PPM1FP49593 454 aaPredicted RBP14.15□□□□□ -0.14
HMGN3-201ENST00000275036 GFERP55789 205 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 PDE1BQ01064 536 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 LY6DQ14210 128 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 POU6F1Q14863 301 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 SNAP47Q5SQN1 464 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 FNBP1LQ5T0N5 605 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 TRIM48Q8IWZ4 208 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 ZNF843Q8N446 348 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 AVL9Q8NBF6 648 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 AGBL5Q8NDL9 886 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 GPR150Q8NGU9 434 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 UBE2Q2Q8WVN8 375 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 TAAR9Q96RI9 348 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 C19orf43Q9BQ61 176 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 ZMYND15Q9H091 742 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 ETNK1Q9HBU6 452 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 SLC40A1Q9NP59 571 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 PSMD13Q9UNM6 376 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 ZNF148Q9UQR1 794 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 PPP2R2CQ9Y2T4 447 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 PCDHGA3Q9Y5H0 932 aa14.15□□□□□ -0.14
HMGN3-201ENST00000275036 DNMT3AQ9Y6K1 912 aaPredicted RBP14.15□□□□□ -0.14
HMGN3-201ENST00000275036 TRBV5-4A0A0C4DH59 114 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 CCDC78A2IDD5 438 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 EIF4E1BA6NMX2 242 aaKnown RBP14.14□□□□□ -0.15
HMGN3-201ENST00000275036 EFCAB7A8K855 629 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 KCNJ13O60928 360 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 IFNB1P01574 187 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 TYRP1P17643 537 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 VCLP18206 1134 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 MC4RP32245 332 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 CSTF2P33240 577 aaKnown RBP eCLIP14.14□□□□□ -0.15
HMGN3-201ENST00000275036 HADHAP40939 763 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 GRIA1P42261 906 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 SEPT6Q14141 434 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 GPR18Q14330 331 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 KCTD19Q17RG1 926 aaPredicted RBP14.14□□□□□ -0.15
HMGN3-201ENST00000275036 LONRF2Q1L5Z9 754 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 METRNLQ641Q3 311 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 ANKS6Q68DC2 871 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 SNX20Q7Z614 316 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 NXPE1Q8N323 547 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 LILRA3Q8N6C8 439 aaPredicted RBP14.14□□□□□ -0.15
HMGN3-201ENST00000275036 OR52K1Q8NGK4 314 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 ALS2CR12Q96Q35 445 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 FRMD8P1Q9BZ68 369 aaPredicted RBP14.14□□□□□ -0.15
HMGN3-201ENST00000275036 B3GNT4Q9C0J1 378 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms