RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MAGEE2Q8TD90 523 aaPredicted RBP13.56□□□□□ -0.24
NPC1-201ENST00000269228 OSBPL6Q9BZF3 934 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 PHF24Q9UPV7 400 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 POLR1DQ9Y2S0 133 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 ZNF840PA6NDX5 716 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 RGS5O15539 181 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 UROSP10746 265 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 GKP32189 559 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 VIPR1P32241 457 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 MSX2P35548 267 aaPredicted RBP13.56□□□□□ -0.24
NPC1-201ENST00000269228 BMPR1AP36894 532 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 BIKQ13323 160 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 C1DQ13901 141 aaKnown RBP13.56□□□□□ -0.24
NPC1-201ENST00000269228 PLEKHG6Q3KR16 790 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 ITPRIPL2Q3MIP1 535 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 MRPL10Q7Z7H8 261 aaKnown RBP13.56□□□□□ -0.24
NPC1-201ENST00000269228 SRFBP1Q8NEF9 429 aaKnown RBP13.56□□□□□ -0.24
NPC1-201ENST00000269228 PPM1MQ96MI6 270 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 SLC2A13Q96QE2 648 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 MCCC1Q96RQ3 725 aaPredicted RBP13.56□□□□□ -0.24
NPC1-201ENST00000269228 MTRRQ9UBK8 725 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 BACE2Q9Y5Z0 518 aa13.56□□□□□ -0.24
NPC1-201ENST00000269228 CXorf49A8MYA2 514 aaPredicted RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 C9JVG2 144 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 SLC28A2O43868 658 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 OAZ2O95190 189 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 CLPTM1O96005 669 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 BUD31P41223 144 aaPredicted RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 BLKP51451 505 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 ATP13A5Q4VNC0 1218 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 ZNF776Q68DI1 518 aaPredicted RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 NET1Q7Z628 596 aaPredicted RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 CPSF7Q8N684 471 aaKnown RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 NEMP2A6NFY4 417 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 ENTPD5O75356 428 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 PSMB9P28065 219 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 SPESP1Q6UW49 350 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 PLEKHM3Q6ZWE6 761 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 PNPT1Q8TCS8 783 aaKnown RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 C1orf74Q96LT6 269 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 SSU72Q9NP77 194 aaKnown RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 GPN3Q9UHW5 284 aaPredicted RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 KIAA0100Q14667 2235 aaKnown RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 PTGES3LE9PB15 166 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 SLC6A2P23975 617 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 IDH2P48735 452 aaKnown RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 POLR2JP52435 117 aaKnown RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 NUP107P57740 925 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 LAPTM5Q13571 262 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 MARCH8Q5T0T0 291 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 LRRC66Q68CR7 880 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 TPRG1Q6ZUI0 275 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 PACS2Q86VP3 889 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 SETD9Q8NE22 299 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 EXOSC8Q96B26 276 aaKnown RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 ZSCAN5AQ9BUG6 496 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 MTHFRP42898 656 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 ZCCHC10Q8TBK6 192 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 TLCD1Q96CP7 247 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 MRPL48Q96GC5 212 aaKnown RBP13.55□□□□□ -0.24
NPC1-201ENST00000269228 BRINP2Q9C0B6 783 aa13.55□□□□□ -0.24
NPC1-201ENST00000269228 DLDP09622 509 aaKnown RBP13.54□□□□□ -0.24
NPC1-201ENST00000269228 HNRNPA1P09651 372 aaKnown RBP eCLIP13.54□□□□□ -0.24
NPC1-201ENST00000269228 GNAZP19086 355 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 RING1Q06587 406 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 BNIP2Q12982 314 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 FAM20CQ8IXL6 584 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 IGSF8Q969P0 613 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 TMEM245Q9H330 911 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 GTPBP1O00178 669 aaKnown RBP13.54□□□□□ -0.24
NPC1-201ENST00000269228 NBNO60934 754 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 SERPINB7O75635 380 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 PPIBP23284 216 aaKnown RBP13.54□□□□□ -0.24
NPC1-201ENST00000269228 ASMTP46597 345 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 NDUFA9Q16795 377 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 RNF44Q7L0R7 432 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 CLDN19Q8N6F1 224 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 PYCR2Q96C36 320 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 RMND5BQ96G75 393 aaPredicted RBP13.54□□□□□ -0.24
NPC1-201ENST00000269228 CCDC28BQ9BUN5 200 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 BTBD1Q9H0C5 482 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 NKX2-4Q9H2Z4 354 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 SPHK2Q9NRA0 654 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.54□□□□□ -0.24
NPC1-201ENST00000269228 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.54□□□□□ -0.24
NPC1-201ENST00000269228 AGPSO00116 658 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 SLC35G6P0C7Q6 338 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 CLK3P49761 638 aaKnown RBP13.54□□□□□ -0.24
NPC1-201ENST00000269228 MAPK12P53778 367 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 VPS26BQ4G0F5 336 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 MSS51Q4VC12 460 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 USP39Q53GS9 565 aaKnown RBP13.54□□□□□ -0.24
NPC1-201ENST00000269228 POMGNT2Q8NAT1 580 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 OTUB2Q96DC9 234 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 SFXN1Q9H9B4 322 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 TMLHEQ9NVH6 421 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 SLC9A8Q9Y2E8 581 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 CFIP05156 583 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 AQP1P29972 269 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 DHPSP49366 369 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms