RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PTSQ03393 145 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 C2orf80Q0P641 193 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 RALGPS1Q5JS13 557 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 C9orf64Q5T6V5 341 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 GALNT13Q8IUC8 556 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 UBR7Q8N806 425 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 OR7A2PQ8NGA2 310 aa13.84□□□□□ -0.19
CDH3-201ENST00000264012 CLK4Q9HAZ1 481 aaKnown RBP13.84□□□□□ -0.19
CDH3-201ENST00000264012 ELOVL7A1L3X0 281 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 FPGTO14772 594 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 FYNP06241 537 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 F7P08709 466 aaPredicted RBP13.83□□□□□ -0.19
CDH3-201ENST00000264012 C21orf59P57076 290 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 CARD16Q5EG05 197 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 PDZK1Q5T2W1 519 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 ERICH5Q6P6B1 374 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 CNKSR3Q6P9H4 555 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 MYDGFQ969H8 173 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 SLC38A2Q96QD8 506 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 NUAK2Q9H093 628 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 OXSMQ9NWU1 459 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 TAS2R1Q9NYW7 299 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 AKAP7Q9P0M2 348 aaPredicted RBP13.83□□□□□ -0.19
CDH3-201ENST00000264012 ITGB1BP2Q9UKP3 347 aa13.83□□□□□ -0.19
CDH3-201ENST00000264012 EFCAB10A6NFE3 127 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 NIPSNAP2O75323 286 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 ASLP04424 464 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 BLMHQ13867 455 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 RSBN1Q5VWQ0 802 aaPredicted RBP13.83□□□□□ -0.2
CDH3-201ENST00000264012 POMGNT2Q8NAT1 580 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 PIWIL1Q96J94 861 aaKnown RBP13.83□□□□□ -0.2
CDH3-201ENST00000264012 MUC13Q9H3R2 512 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 ALG2Q9H553 416 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 SUV39H2Q9H5I1 410 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 FADS3Q9Y5Q0 445 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 TRBV23OR9-2A0A075B6M9 112 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 ABHD14A-ACY1A0A1B0GW23 586 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 CCNYL3P0C7X3 344 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 CYP4B1P13584 511 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 UGT1A6P19224 532 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 UGT1A1P22309 533 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 UGT1A4P22310 534 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 UGT1A3P35503 534 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 UGT1A5P35504 534 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 STX4Q12846 297 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 MTAPQ13126 283 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 PRKD1Q15139 912 aaPredicted RBP13.83□□□□□ -0.2
CDH3-201ENST00000264012 GPR33Q49SQ1 333 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 CEP78Q5JTW2 689 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 TRIQKQ629K1 86 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 TMC5Q6UXY8 1006 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 HDHD2Q9H0R4 259 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 SEMA3GQ9NS98 782 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 MRPS33Q9Y291 106 aaKnown RBP13.83□□□□□ -0.2
CDH3-201ENST00000264012 A0A1W2PQ45 241 aaPredicted RBP13.83□□□□□ -0.2
CDH3-201ENST00000264012 A0A1W2PQY0 241 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 PRKCGP05129 697 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 GJA1P17302 382 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 SLC18A1P54219 525 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 KLHL35Q6PF15 583 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 ARNTL2Q8WYA1 636 aa13.83□□□□□ -0.2
CDH3-201ENST00000264012 DOT1LQ8TEK3 1739 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 MTMR11A4FU01 709 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 OLIG2Q13516 323 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 IRAK1BP1Q5VVH5 260 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 ZC3HC1Q86WB0 502 aaKnown RBP13.82□□□□□ -0.2
CDH3-201ENST00000264012 KLHL23Q8NBE8 558 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 SLC2A6Q9UGQ3 507 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 GABRQQ9UN88 632 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 ALOX12P18054 663 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 BMP7P18075 431 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 ECT2LQ008S8 904 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 KHDC1Q4VXA5 237 aaKnown RBP13.82□□□□□ -0.2
CDH3-201ENST00000264012 RFTN2Q52LD8 501 aaPredicted RBP13.82□□□□□ -0.2
CDH3-201ENST00000264012 LIX1Q8N485 282 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 ROPN1LQ96C74 230 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 TTLL2Q9BWV7 592 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 HMG20AQ9NP66 347 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 COL2A1P02458 1487 aaPredicted RBP13.82□□□□□ -0.2
CDH3-201ENST00000264012 PIPSLA2A3N6 862 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 OR6B1O95007 311 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 VIPP01282 170 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 ALPIP09923 528 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 PRPS2P11908 318 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 SLC9B1Q4ZJI4 515 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 MS4A13Q5J8X5 152 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 MAMDC4Q6UXC1 1216 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 C15orf39Q6ZRI6 1047 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 TRIT1Q9H3H1 467 aaKnown RBP13.82□□□□□ -0.2
CDH3-201ENST00000264012 C1orf109Q9NX04 203 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 ERGIC3Q9Y282 383 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 GSTK1Q9Y2Q3 226 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 NBNO60934 754 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 AHSGP02765 367 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 HAPLN1P10915 354 aaPredicted RBP13.82□□□□□ -0.2
CDH3-201ENST00000264012 IMPDH1P20839 514 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 MTHFRP42898 656 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 HERVK_113P63132 956 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 RNF44Q7L0R7 432 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 SRFBP1Q8NEF9 429 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms