RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 CLEC4FQ8N1N0 589 aa9.94□□□□□ -0.82
LIG3-201ENST00000262327 FBXO30Q8TB52 745 aa9.94□□□□□ -0.82
LIG3-201ENST00000262327 STAG3L4Q8TBR4 150 aa9.94□□□□□ -0.82
LIG3-201ENST00000262327 EEF1AKMT1Q8WVE0 214 aa9.94□□□□□ -0.82
LIG3-201ENST00000262327 HIPK3Q9H422 1215 aa9.94□□□□□ -0.82
LIG3-201ENST00000262327 SMURF2Q9HAU4 748 aa9.94□□□□□ -0.82
LIG3-201ENST00000262327 PLGRKTQ9HBL7 147 aa9.94□□□□□ -0.82
LIG3-201ENST00000262327 CD274Q9NZQ7 290 aa9.94□□□□□ -0.82
LIG3-201ENST00000262327 ZMYM5Q9UJ78 669 aa9.94□□□□□ -0.82
LIG3-201ENST00000262327 TSC22D4Q9Y3Q8 395 aa9.94□□□□□ -0.82
LIG3-201ENST00000262327 PCDHGC4Q9Y5F7 938 aa9.94□□□□□ -0.82
LIG3-201ENST00000262327 COMMD10Q9Y6G5 202 aa9.94□□□□□ -0.82
LIG3-201ENST00000262327 DYTNA2CJ06 578 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 PAPSS2O95340 614 aaPredicted RBP9.93□□□□□ -0.82
LIG3-201ENST00000262327 CNPP09543 421 aaKnown RBP9.93□□□□□ -0.82
LIG3-201ENST00000262327 BMP1P13497 986 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 UGT1A1P22309 533 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 UGT1A4P22310 534 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 UGT1A3P35503 534 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 UGT1A5P35504 534 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 HK3P52790 923 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 NFKB2Q00653 900 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 C1orf53Q5VUE5 145 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 PSAPL1Q6NUJ1 521 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 ANKRD33Q7Z3H0 272 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 ZNF683Q8IZ20 524 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 BBS5Q8N3I7 341 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 TNIP2Q8NFZ5 429 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 TANKQ92844 425 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 FUBP1Q96AE4 644 aaKnown RBP9.93□□□□□ -0.82
LIG3-201ENST00000262327 TBCDQ9BTW9 1192 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 CENPOQ9BU64 300 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 OSBPL10Q9BXB5 764 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 POLR1EQ9GZS1 481 aaKnown RBP9.93□□□□□ -0.82
LIG3-201ENST00000262327 ING2Q9H160 280 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 RABL2BQ9UNT1 228 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 TLR6Q9Y2C9 796 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 DGKBQ9Y6T7 804 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 KANSL1LA0AUZ9 987 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 PARNO95453 639 aaKnown RBP9.93□□□□□ -0.82
LIG3-201ENST00000262327 ALBP02768 609 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 OR1G1P47890 313 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 RXRGP48443 463 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 PRMT9Q6P2P2 845 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 SPRED1Q7Z699 444 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 PATL1Q86TB9 770 aaKnown RBP9.93□□□□□ -0.82
LIG3-201ENST00000262327 MDGA1Q8NFP4 955 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 FIG4Q92562 907 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.93□□□□□ -0.82
LIG3-201ENST00000262327 SLC39A13Q96H72 371 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 BIRC8Q96P09 236 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 DGCR6LQ9BY27 220 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 CCSER2Q9H7U1 834 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 CARS2Q9HA77 564 aaKnown RBP9.93□□□□□ -0.82
LIG3-201ENST00000262327 TBCCD1Q9NVR7 557 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 TMEM248Q9NWD8 314 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 TAS2R13Q9NYV9 303 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 INPPL1O15357 1258 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 KERAO60938 352 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 ZBTB11O95625 1053 aaPredicted RBP9.93□□□□□ -0.82
LIG3-201ENST00000262327 GUCA1CO95843 209 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 EOMESO95936 686 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 G6PDP11413 515 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 PRKACGP22612 351 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 MAP4P27816 1152 aaKnown RBP9.93□□□□□ -0.82
LIG3-201ENST00000262327 NEK2P51955 445 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 FAM189BP81408 668 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 RAD51Q06609 339 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 TUSC3Q13454 348 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 RCAN2Q14206 197 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 SGO1Q5FBB7 561 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 C6orf183Q5T699 404 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 ABI1Q8IZP0 508 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 DTWD1Q8N5C7 304 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 TBC1D15Q8TC07 691 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 PROKR1Q8TCW9 393 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 FBXO32Q969P5 355 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 TMBIM1Q969X1 311 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 KIAA1191Q96A73 305 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 LINGO1Q96FE5 620 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 ITCHQ96J02 903 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 NSMCE2Q96MF7 247 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 TOX2Q96NM4 488 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 MRGBPQ9NV56 204 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 AIG1Q9NVV5 245 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 PKD2L2Q9NZM6 624 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 MARCH2Q9P0N8 246 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 AASSQ9UDR5 926 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 FKBPLQ9UIM3 349 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 CORINQ9Y5Q5 1042 aa9.93□□□□□ -0.82
LIG3-201ENST00000262327 SH3PXD2BA1X283 911 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 H0Y858 1186 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 FFAR3O14843 346 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 GPR42O15529 346 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 MATN4O95460 622 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 COL6A1P12109 1028 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 TRPC1P48995 793 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 MNX1P50219 401 aaPredicted RBP9.92□□□□□ -0.82
LIG3-201ENST00000262327 TAF10Q12962 218 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 SERINC3Q13530 473 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms