RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 USF2Q15853 346 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 KLHL35Q6PF15 583 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 STRADAQ7RTN6 431 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 LAPTM4BQ86VI4 370 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 OOSP2Q86WS3 158 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 PEX5LQ8IYB4 626 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 SVOPLQ8N434 492 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 RAD51AP1Q96B01 352 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 APOLD1Q96LR9 279 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 MAGEB10Q96LZ2 347 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 TRMOQ9BU70 441 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC6A15Q9H2J7 730 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 GLOD4Q9HC38 313 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 NEK6Q9HC98 313 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 GDAP2Q9NXN4 497 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC15A5A6NIM6 579 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 GCATO75600 419 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 CELF2O95319 508 aaKnown RBP9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 VNN1O95497 513 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 IFNA7P01567 189 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC2A2P11168 524 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 CTPS1P17812 591 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 BMP7P18075 431 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 HUNKP57058 714 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 DAG1Q14118 895 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 EFR3AQ14156 821 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 PON2Q15165 354 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 PRAMEF19Q5SWL8 479 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 RETSATQ6NUM9 610 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 ESRP1Q6NXG1 681 aaKnown RBP9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 ULK3Q6PHR2 472 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 ASCC1Q8N9N2 400 aaKnown RBP9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 STON2Q8WXE9 905 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 ASB9Q96DX5 294 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 BARD1Q99728 777 aaKnown RBP9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 RHBGQ9H310 441 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 STARD7Q9NQZ5 370 aa9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 RABL2AQ9UBK7 228 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL2-201ENST00000260327 PDHXO00330 501 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 CXCR6O00574 342 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 FPGTO14772 594 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 AP2A1O95782 977 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 PENKP01210 267 aaPredicted RBP9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 MYBPC1Q00872 1141 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 STK40Q8N2I9 435 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 KAT2AQ92830 837 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 IGSF9Q9P2J2 1179 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 RABL2BQ9UNT1 228 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 KCNH4Q9UQ05 1017 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 ENTPD4Q9Y227 616 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 ADM5C9JUS6 153 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 PEX10O60683 326 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 PRAMEF1O95521 474 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 CCNYL3P0C7X3 344 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 MAGEA2P43356 314 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 MEP1AQ16819 746 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 RBM48Q5RL73 367 aaKnown RBP9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 DPEP3Q9H4B8 488 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 CCDC177Q9NQR7 707 aaPredicted RBP9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 XPNPEP1Q9NQW7 623 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 MAT2BQ9NZL9 334 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 ADAMTS6Q9UKP5 1117 aa9.65□□□□□ -0.87
CTDSPL2-201ENST00000260327 MON2Q7Z3U7 1717 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 A0A0X1KG70 313 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 SMIM30A4D0T7 59 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 CSF2P04141 144 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 MYCLP1P12525 358 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 PORP16435 677 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 TTPAP49638 278 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 PSEN2P49810 448 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 SMIM11AP58511 58 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 C9orf57Q5W0N0 161 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 DOK6Q6PKX4 331 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 BPIFB1Q8TDL5 484 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 SEC14L1Q92503 715 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 TMEM203Q969S6 136 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 TTYH2Q9BSA4 534 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 ARHGEF4Q9NR80 690 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 HPF1Q9NWY4 346 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 SUCOQ9UBS9 1254 aaKnown RBP9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 EBF1Q9UH73 591 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 MRC1P22897 1456 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 TMEM233B4DJY2 109 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 PAGE1O75459 146 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 UGT2B17O75795 530 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 NTSP30990 170 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 HOXD13P35453 343 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 ACADVLP49748 655 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 TAS2R41P59536 307 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 MPP2Q14168 576 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 TBRG1Q3YBR2 411 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 PTCD2Q8WV60 388 aaKnown RBP9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 HEXDCQ8WVB3 486 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 ESAMQ96AP7 390 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 CD320Q9NPF0 282 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 C2CD4BA6NLJ0 364 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 XPNPEP2O43895 674 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 RAP2AP10114 183 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms