RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 KCTD15Q96SI1 283 aaPredicted RBP4.76□□□□□ -1.65
RC3H1-201ENST00000258349 GPSM3Q9Y4H4 160 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 DOCK3Q8IZD9 2030 aa4.76□□□□□ -1.65
RC3H1-201ENST00000258349 FSCN2O14926 492 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 KMOO15229 486 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF432O94892 652 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 EPHX2P34913 555 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ABCG1P45844 678 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 DNASE1L1P49184 302 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ABRQ12979 859 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 SLC9A4Q6AI14 798 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 RHBDF2Q6PJF5 856 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 UBE2R2Q712K3 238 aaPredicted RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 LAPTM4BQ86VI4 370 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 AMIGO1Q86WK6 493 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 NEK7Q8TDX7 302 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 GFM1Q96RP9 751 aaKnown RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 THUMPD1Q9NXG2 353 aaKnown RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 PLCH1Q4KWH8 1693 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 SIPA1L3O60292 1781 aaPredicted RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 BCL9O00512 1426 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 NID2Q14112 1375 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 SPATA31C2B4DYI2 1134 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 GNB5O14775 395 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 CDC40O60508 579 aaKnown RBP eCLIP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 CSDE1O75534 798 aaKnown RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 CXCR3P49682 368 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 IDH3AP50213 366 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 TUBA1BP68363 451 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 PPP2R2BQ00005 443 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 CTBP1Q13363 440 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF311Q5JNZ3 666 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 EARS2Q5JPH6 523 aaKnown RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 TUBA1AQ71U36 451 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 SAMD7Q7Z3H4 446 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 PACRGLQ8N7B6 248 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 PIGKQ92643 395 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 CIB1Q99828 191 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 HIPK3Q9H422 1215 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 MRPL17Q9NRX2 175 aaKnown RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 CALML5Q9NZT1 146 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 DIDO1Q9BTC0 2240 aaKnown RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 TMEM150BA6NC51 233 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 CACNB4O00305 520 aaPredicted RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 TSPAN4O14817 238 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 PQBP1O60828 265 aaKnown RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 SNX4O95219 450 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 C8GP07360 202 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 SLC7A1P30825 629 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 TAS2R40P59535 323 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ADAM8P78325 824 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 SPATA6LQ8N4H0 392 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 CLHC1Q8NHS4 586 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 TLCD1Q96CP7 247 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 SLC6A15Q9H2J7 730 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 DNAJC11Q9NVH1 559 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 FKBP7Q9Y680 259 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 RGPD3A6NKT7 1758 aaPredicted RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 RGPD4Q7Z3J3 1758 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 MMP8P22894 467 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 SEPHS1P49903 392 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 LPCAT4Q643R3 524 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ECHDC2Q86YB7 292 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF615Q8N8J6 731 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 OR8D1Q8WZ84 308 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ZC3H10Q96K80 434 aaKnown RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 C8orf48Q96LL4 319 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 NUSAP1Q9BXS6 441 aaKnown RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 SMPD4Q9NXE4 827 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF639Q9UID6 485 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 NUP50Q9UKX7 468 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 BCORQ6W2J9 1755 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 PDHXO00330 501 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 AKR1A1P14550 325 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 S100A2P29034 98 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ERP29P30040 261 aaKnown RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 HERVK_113P63132 956 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 PHC1P78364 1004 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 KLF10Q13118 480 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 PRAMEF18Q5VWM3 479 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 USP30Q70CQ3 517 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 STRADAQ7RTN6 431 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 OR4C6Q8NH72 309 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 DCAKDQ8WVC6 231 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ERVK-6Q9BXR3 956 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 TTYH1Q9H313 450 aaPredicted RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 CHD3Q12873 2000 aaKnown RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF99A8MXY4 864 aaPredicted RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF208O43345 1280 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 B4GALT4O60513 344 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 SLC25A14O95258 325 aaPredicted RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 RAP2AP10114 183 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 CD247P20963 164 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 BMP6P22004 513 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 OR2B6P58173 313 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 CSTF1Q05048 431 aaKnown RBP4.75□□□□□ -1.65
RC3H1-201ENST00000258349 FAM189A2Q15884 450 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 ATP13A4Q4VNC1 1196 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 CERS6Q6ZMG9 384 aa4.75□□□□□ -1.65
RC3H1-201ENST00000258349 RIOX2Q8IUF8 465 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms