RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 DCDC1P59894 354 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 TUBB3Q13509 450 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 KPNB1Q14974 876 aaKnown RBP18.63■□□□□ 0.57
TRIM47-201ENST00000254816 SLC9B1Q4ZJI4 515 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 FAM91A1Q658Y4 838 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 NUDT18Q6ZVK8 323 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 PELI3Q8N2H9 469 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 TRAM1L1Q8N609 369 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 AP2M1Q96CW1 435 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 PRR5-ARHGAP8B1AHC4 643 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 B2RBV5 119 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 C2CD4DB7Z1M9 353 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 NEMP1O14524 444 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 MMP20O60882 483 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 CDH13P55290 713 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 HERVK_113P63132 956 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 ARHGAP8P85298 464 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 NFKB2Q00653 900 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 LRIT3Q3SXY7 679 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 SH2D4BQ5SQS7 431 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 FRMD7Q6ZUT3 714 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 ERN2Q76MJ5 926 aaKnown RBP18.63■□□□□ 0.57
TRIM47-201ENST00000254816 ZBTB2Q8N680 514 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 L3HYPDHQ96EM0 354 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 SIKE1Q9BRV8 207 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 ERVK-6Q9BXR3 956 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 DNAJC28Q9NX36 388 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 COL4A2P08572 1712 aa18.63■□□□□ 0.57
TRIM47-201ENST00000254816 C1QTNF3-AMACRE9PGA6 284 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 WNT9AO14904 365 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 AREL1O15033 823 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 JUNP05412 331 aaKnown RBP18.62■□□□□ 0.57
TRIM47-201ENST00000254816 P2RY2P41231 377 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 CNTN1Q12860 1018 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 ZNF284Q2VY69 593 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 C2orf27AQ580R0 203 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 FBXO39Q8N4B4 442 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 COQ10AQ96MF6 247 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 NSUN5Q96P11 429 aaKnown RBP18.62■□□□□ 0.57
TRIM47-201ENST00000254816 CCDC106Q9BWC9 280 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 MATN2O00339 956 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 UBFD1O14562 309 aaKnown RBP18.62■□□□□ 0.57
TRIM47-201ENST00000254816 INPP4BO15327 924 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 GRID2O43424 1007 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 ATP1B2P14415 290 aaPredicted RBP18.62■□□□□ 0.57
TRIM47-201ENST00000254816 KIR2DL1P43626 348 aaPredicted RBP18.62■□□□□ 0.57
TRIM47-201ENST00000254816 ELP6Q0PNE2 266 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 CCDC85BQ15834 202 aaPredicted RBP18.62■□□□□ 0.57
TRIM47-201ENST00000254816 EPGNQ6UW88 154 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 DSG4Q86SJ6 1040 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 WDR60Q8WVS4 1066 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 ESAMQ96AP7 390 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 ZSCAN5AQ9BUG6 496 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 NUF2Q9BZD4 464 aa18.62■□□□□ 0.57
TRIM47-201ENST00000254816 SPATS2LQ9NUQ6 558 aaKnown RBP18.62■□□□□ 0.57
TRIM47-201ENST00000254816 GOLGA8QA0A0J9YX86 632 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 GOLGA8OA6NCC3 632 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 SPECC1L-ADORA2AF8WAN1 911 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 GOLGA8NF8WBI6 632 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 PPP6CO00743 305 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 MID1O15344 667 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 C6P13671 934 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 EEF1DP29692 281 aaKnown RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 CCR7P32248 378 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 PGM1P36871 562 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 AGTR2P50052 363 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 PDCD2Q16342 344 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 CUZD1Q86UP6 607 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 GPSM1Q86YR5 675 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 BEND7Q8N7W2 519 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 RBM15BQ8NDT2 890 aaKnown RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 DTD2Q96FN9 168 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 DCUN1D1Q96GG9 259 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 RSRC1Q96IZ7 334 aaKnown RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 HEBP1Q9NRV9 189 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 SMOXQ9NWM0 555 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 ADAMTS6Q9UKP5 1117 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 SYCE1LA8MT33 242 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 RECQL5O94762 991 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 OR56A5P0C7T3 313 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 POU3F3P20264 500 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 CTHP32929 405 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 SESN3P58005 492 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 ENPP2Q13822 863 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 PON2Q15165 354 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 IER5LQ5T953 404 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 SEL1L3Q68CR1 1132 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 RAB44Q7Z6P3 723 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 KIRREL3Q8IZU9 778 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 ENDOVQ8N8Q3 282 aaKnown RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 PDLIM5Q96HC4 596 aaKnown RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 WDR55Q9H6Y2 383 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 RAD18Q9NS91 495 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 CD274Q9NZQ7 290 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 NFKBIL1Q9UBC1 381 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 TAGLN3Q9UI15 199 aa18.61■□□□□ 0.57
TRIM47-201ENST00000254816 APOBEC2Q9Y235 224 aaKnown RBP18.61■□□□□ 0.57
TRIM47-201ENST00000254816 F5P12259 2224 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 OR2AG2A6NM03 316 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms