RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ALG2Q9H553 416 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 RIC8BQ9NVN3 520 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 EVLQ9UI08 416 aaPredicted RBP19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 PCDHB1Q9Y5F3 818 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 SYNCRIPO60506 623 aaKnown RBP19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 ARL1P40616 181 aaPredicted RBP19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 CASP2P42575 452 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 PCBP2Q15366 365 aaKnown RBP eCLIP19.27■□□□□ 0.688e-7■■■■□ 20.5
CDC42EP1-201ENST00000249014 Q6ZNB5 142 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 EPHX4Q8IUS5 362 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 ADGRG5Q8IZF4 528 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 DCAF4L2Q8NA75 395 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 AUTS2Q8WXX7 1259 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 INTS7Q9NVH2 962 aaKnown RBP19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 PRSS21Q9Y6M0 314 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 ZNF106Q9H2Y7 1883 aaKnown RBP19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 ARHGAP10A1A4S6 786 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 SAC3D1A6NKF1 404 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 PLOD2O00469 737 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 TPST1O60507 370 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 LATS1O95835 1130 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 NELFEP18615 380 aaKnown RBP19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 SOX11P35716 441 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 PPP3CCP48454 512 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 INPP5AQ14642 412 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 ATP6AP1LQ52LC2 224 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 NHSL2Q5HYW2 709 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 PTRHD1Q6GMV3 140 aaKnown RBP19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 CERS6Q6ZMG9 384 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 TMCO2Q7Z6W1 182 aaPredicted RBP19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 CLDN19Q8N6F1 224 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 OR4F6Q8NGB9 312 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 METTL6Q8TCB7 284 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 GRIN3AQ8TCU5 1115 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 DIS3LQ8TF46 1054 aaKnown RBP19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 TMEM79Q9BSE2 394 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 AGPAT4Q9NRZ5 378 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 ZIM2Q9NZV7 527 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 NDUFA13Q9P0J0 144 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 LEF1Q9UJU2 399 aaPredicted RBP19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 CPQQ9Y646 472 aa19.27■□□□□ 0.68
CDC42EP1-201ENST00000249014 PIKFYVEQ9Y2I7 2098 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 VILLO15195 856 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 FFAR2O15552 330 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 HNRNPRO43390 633 aaKnown RBP19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 CNPP09543 421 aaKnown RBP19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 NCK1P16333 377 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 PSMA4P25789 261 aaKnown RBP19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 ATN1P54259 1190 aaPredicted RBP19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 AP1S1P61966 158 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 LIPEQ05469 1076 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 SLC5A9Q2M3M2 681 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 SPOUT1Q5T280 376 aaKnown RBP19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 IL27RAQ6UWB1 636 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 RBM44Q6ZP01 1051 aaKnown RBP19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 ADAMTSL2Q86TH1 951 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 NUDT8Q8WV74 236 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 SEZ6LQ9BYH1 1024 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 CLPBQ9H078 707 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 NSUN3Q9H649 340 aaKnown RBP19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 ZFYVE1Q9HBF4 777 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 USP22Q9UPT9 525 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 SLC4A7Q9Y6M7 1214 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 COMMD3-BMI1R4GMX3 469 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 C1orf232A0A0U1RR37 186 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 FAM234BA2RU67 622 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 KATNA1O75449 491 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 GTF2H2Q13888 395 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 SPATS1Q496A3 300 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 HABP4Q5JVS0 413 aaKnown RBP19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 NANOGP8Q6NSW7 305 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 GTF2H2CQ6P1K8 395 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 PTRH1Q86Y79 214 aaKnown RBP19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 CMTR2Q8IYT2 770 aaKnown RBP19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 DGCR14Q96DF8 476 aaKnown RBP19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 CCT7Q99832 543 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 C17orf80Q9BSJ5 609 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 ASB8Q9H765 288 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 NANOGQ9H9S0 305 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 IL21Q9HBE4 155 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 IL26Q9NPH9 171 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 PFDN4Q9NQP4 134 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 ELOVL2Q9NXB9 296 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 CLEC4EQ9ULY5 219 aa19.26■□□□□ 0.67
CDC42EP1-201ENST00000249014 TCRBV5S2A0A599 114 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 TYW5A2RUC4 315 aaKnown RBP19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 PDLIM1O00151 329 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 DLGAP1O14490 977 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 CLDN7O95471 211 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 GUCA1CO95843 209 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 GNRH1P01148 92 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 TRBC1P01850 177 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 ZNF7P17097 686 aaPredicted RBP19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 IL10P22301 178 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 UGT1A1P22309 533 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 UGT1A4P22310 534 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 UGT1A3P35503 534 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 UGT1A5P35504 534 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 NFATC2Q13469 925 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 RAB33AQ14088 237 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms