RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 OR2L2Q8NH16 312 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 OR10G6Q8NH81 332 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 WDR36Q8NI36 951 aaKnown RBP23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 HDAC10Q969S8 669 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 TMEM159Q96B96 161 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 AHCYL2Q96HN2 611 aaKnown RBP23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 RUNDC3BQ96NL0 473 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 MRM3Q9HC36 420 aaKnown RBP23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 ACSL5Q9ULC5 683 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 ATXN7L1Q9ULK2 861 aaPredicted RBP23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 NEU2Q9Y3R4 380 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 PCDHGA8Q9Y5G5 932 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 USP24Q9UPU5 2620 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 CCDC162PA2VCL2 907 aa23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 CASC3O15234 703 aaKnown RBP23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 AP2A2O94973 939 aa23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 RPL10P27635 214 aaKnown RBP23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 CD1CP29017 333 aa23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 FOXN2P32314 431 aa23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 PPARGP37231 505 aaPredicted RBP23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 NSG1P42857 185 aa23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 CDKN1CP49918 316 aaPredicted RBP23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 GABREP78334 506 aa23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 SEPT7Q16181 437 aaKnown RBP23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 METRNLQ641Q3 311 aa23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 IGF2-ASQ6U949 168 aa23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 CERS6Q6ZMG9 384 aa23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 SCHIP1Q9P0W5 487 aaPredicted RBP23.9■■□□□ 1.42
SDF2L1-201ENST00000248958 LILRA5A6NI73 299 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 F8W8V4 182 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 DUX1O43812 170 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 DXOO77932 396 aaKnown RBP23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 GOT2P00505 430 aaKnown RBP23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 MLNP12872 115 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 BRAFP15056 766 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 SLC19A1P41440 591 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 MLLT3P42568 568 aaPredicted RBP23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 PAFAH1B1P43034 410 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 CREG2Q8IUH2 290 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 MCUQ8NE86 351 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 OR6P1Q8NGX9 317 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 OR4L1Q8NH43 312 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 CPT1BQ92523 772 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 SLCO2A1Q92959 643 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 CXorf40BQ96DE9 158 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 EPB41L5Q9HCM4 733 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 CHRAC1Q9NRG0 131 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 ZNF624Q9P2J8 865 aaPredicted RBP23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 SLC2A6Q9UGQ3 507 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 SATB2Q9UPW6 733 aa23.89■■□□□ 1.41
SDF2L1-201ENST00000248958 SGTAO43765 313 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 MPOP05164 745 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 PBLDP30039 288 aaPredicted RBP23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 DRG2P55039 364 aaKnown RBP23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 TRA2AQ13595 282 aaKnown RBP eCLIP23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 NFE2L1Q14494 772 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 PPP1R7Q15435 360 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 DBN1Q16643 649 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 FASTKD1Q53R41 847 aaKnown RBP23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 C3orf38Q5JPI3 329 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 AARS2Q5JTZ9 985 aaKnown RBP23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 TMEM71Q6P5X7 295 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 PACS1Q6VY07 963 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 ZNF534Q76KX8 674 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 B3GNT8Q7Z7M8 397 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 SLITRK4Q8IW52 837 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 PIANPQ8IYJ0 282 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 OR4D9Q8NGE8 314 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 HM13Q8TCT9 377 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 ZNF778Q96MU6 729 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 ZNF578Q96N58 590 aaPredicted RBP23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 CCM2Q9BSQ5 444 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 KIFC1Q9BW19 673 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 XAB2Q9HCS7 855 aaKnown RBP23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 AKAP7Q9P0M2 348 aaPredicted RBP23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 PCYOX1Q9UHG3 505 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 ANAPC5Q9UJX4 755 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 CEP295Q9C0D2 2601 aa23.88■■□□□ 1.41
SDF2L1-201ENST00000248958 TCRBV7S3A2A0A539 114 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 BRINP1O60477 761 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 MGAT1P26572 445 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 PPM1FP49593 454 aaPredicted RBP23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 CLCA4Q14CN2 919 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 ZNF449Q6P9G9 518 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 TMEM26Q6ZUK4 368 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 USP53Q70EK8 1073 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 CAPZA3Q96KX2 299 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 FOXP3Q9BZS1 431 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 DDX47Q9H0S4 455 aaKnown RBP23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 RDH14Q9HBH5 336 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 TREX1Q9NSU2 369 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 WDR37Q9Y2I8 494 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 AKAP13Q12802 2813 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 PIKFYVEQ9Y2I7 2098 aa23.87■■□□□ 1.41
SDF2L1-201ENST00000248958 OR51F1A6NGY5 319 aa23.86■■□□□ 1.41
SDF2L1-201ENST00000248958 CCDC188H7C350 402 aa23.86■■□□□ 1.41
SDF2L1-201ENST00000248958 PRSS56P0CW18 603 aa23.86■■□□□ 1.41
SDF2L1-201ENST00000248958 RBMS1P29558 406 aaKnown RBP23.86■■□□□ 1.41
SDF2L1-201ENST00000248958 LIMK2P53671 638 aa23.86■■□□□ 1.41
SDF2L1-201ENST00000248958 WDR74Q6RFH5 385 aaPredicted RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms