RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 FOXM1Q08050 763 aa21.64■■□□□ 1.05
RNF39-201ENST00000244360 VPS26BQ4G0F5 336 aa21.64■■□□□ 1.05
RNF39-201ENST00000244360 ISLR2Q6UXK2 745 aa21.64■■□□□ 1.05
RNF39-201ENST00000244360 ZBTB49Q6ZSB9 765 aa21.64■■□□□ 1.05
RNF39-201ENST00000244360 ACDQ96AP0 544 aa21.64■■□□□ 1.05
RNF39-201ENST00000244360 RMND5BQ96G75 393 aaPredicted RBP21.64■■□□□ 1.05
RNF39-201ENST00000244360 TM6SF2Q9BZW4 377 aa21.64■■□□□ 1.05
RNF39-201ENST00000244360 C8orf4Q9NR00 106 aa21.64■■□□□ 1.05
RNF39-201ENST00000244360 CCM2LQ9NUG4 571 aaPredicted RBP21.64■■□□□ 1.05
RNF39-201ENST00000244360 ST14Q9Y5Y6 855 aa21.64■■□□□ 1.05
RNF39-201ENST00000244360 IQCF5A8MTL0 148 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 ANGPT2O15123 496 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 SMAD6O43541 496 aaKnown RBP21.63■■□□□ 1.05
RNF39-201ENST00000244360 CYBBP04839 570 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 HSD17B1P14061 328 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 MNX1P50219 401 aaPredicted RBP21.63■■□□□ 1.05
RNF39-201ENST00000244360 RBBP7Q16576 425 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 CPXM2Q8N436 756 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 BRINP2Q9C0B6 783 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 NOL11Q9H8H0 719 aaKnown RBP21.63■■□□□ 1.05
RNF39-201ENST00000244360 PFDN4Q9NQP4 134 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 MRPL17Q9NRX2 175 aaKnown RBP21.63■■□□□ 1.05
RNF39-201ENST00000244360 GID8Q9NWU2 228 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 CEPT1Q9Y6K0 416 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 AK5Q9Y6K8 562 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 NME4O00746 187 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 SOCS5O75159 536 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 TRBC1P01850 177 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 CDH2P19022 906 aaPredicted RBP21.63■■□□□ 1.05
RNF39-201ENST00000244360 ALDH3B2P48448 385 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 DIO3P55073 304 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 PCBP2Q15366 365 aaKnown RBP eCLIP21.63■■□□□ 1.05
RNF39-201ENST00000244360 CDKN3Q16667 212 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 MPP7Q5T2T1 576 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 INTS11Q5TA45 600 aaKnown RBP21.63■■□□□ 1.05
RNF39-201ENST00000244360 ADAMTSL2Q86TH1 951 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 GPR65Q8IYL9 337 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 EZH1Q92800 747 aaPredicted RBP21.63■■□□□ 1.05
RNF39-201ENST00000244360 LRCH3Q96II8 777 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 CIB1Q99828 191 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 MUC13Q9H3R2 512 aa21.63■■□□□ 1.05
RNF39-201ENST00000244360 SARS2Q9NP81 518 aaKnown RBP21.63■■□□□ 1.05
RNF39-201ENST00000244360 LSM7Q9UK45 103 aaKnown RBP21.63■■□□□ 1.05
RNF39-201ENST00000244360 TRBV5-4A0A0C4DH59 114 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 MYOCOSA0A1B0GUC4 107 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 ZNF839A8K0R7 811 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 TEX28O15482 410 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 PRAMEF1O95521 474 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 ZFP36L2P47974 494 aaKnown RBP21.62■■□□□ 1.05
RNF39-201ENST00000244360 RCAN2Q14206 197 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 RPS6KA2Q15349 733 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 SBSNQ6UWP8 590 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 HTR3DQ70Z44 454 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 SERPINA9Q86WD7 417 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 CMTR2Q8IYT2 770 aaKnown RBP21.62■■□□□ 1.05
RNF39-201ENST00000244360 MFSD2AQ8NA29 543 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 B4GALNT2Q8NHY0 566 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 SLC29A1Q99808 456 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 TMEM45AQ9NWC5 275 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 RSL24D1Q9UHA3 163 aaKnown RBP21.62■■□□□ 1.05
RNF39-201ENST00000244360 EVLQ9UI08 416 aaPredicted RBP21.62■■□□□ 1.05
RNF39-201ENST00000244360 SLC8A2Q9UPR5 921 aa21.62■■□□□ 1.05
RNF39-201ENST00000244360 ZNF106Q9H2Y7 1883 aaKnown RBP21.62■■□□□ 1.05
RNF39-201ENST00000244360 DYTNA2CJ06 578 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 AKAP10O43572 662 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 LILRB3O75022 631 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 ZNF7P17097 686 aaPredicted RBP21.61■■□□□ 1.05
RNF39-201ENST00000244360 GRIA3P42263 894 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 SLC7A9P82251 487 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 BCL2L1Q07817 233 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 FAM151BQ6UXP7 276 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 SNX20Q7Z614 316 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 TMCO2Q7Z6W1 182 aaPredicted RBP21.61■■□□□ 1.05
RNF39-201ENST00000244360 MYO1HQ8N1T3 1032 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 OR6K2Q8NGY2 324 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 OR2T11Q8NH01 316 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 CCDC97Q96F63 343 aaPredicted RBP21.61■■□□□ 1.05
RNF39-201ENST00000244360 CLPBQ9H078 707 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 ZFYVE1Q9HBF4 777 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.61■■□□□ 1.05
RNF39-201ENST00000244360 TUBA8Q9NY65 449 aaPredicted RBP21.61■■□□□ 1.05
RNF39-201ENST00000244360 ZNF510Q9Y2H8 683 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 SCN8AQ9UQD0 1980 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 ABHD14A-ACY1A0A1B0GW23 586 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 CARNS1A5YM72 827 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 CCL5P13501 91 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 ATP6V1B2P21281 511 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 IL10P22301 178 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 RFC2P35250 354 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 VEGFBP49765 207 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 PDCD4Q53EL6 469 aaKnown RBP21.61■■□□□ 1.05
RNF39-201ENST00000244360 NHSL2Q5HYW2 709 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 C1orf53Q5VUE5 145 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 LCN8Q6JVE9 175 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 GAREM2Q75VX8 874 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 SLC15A3Q8IY34 581 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 RBFAQ8N0V3 343 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 CANT1Q8WVQ1 401 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 BHMTQ93088 406 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 ESAMQ96AP7 390 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms