RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CACNG1Q06432 222 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 MSS51Q4VC12 460 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 FNBP1LQ5T0N5 605 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 AGAP9Q5VTM2 703 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 METRNLQ641Q3 311 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 PPP1R21Q6ZMI0 780 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 USP53Q70EK8 1073 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 LDB1Q86U70 411 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-201ENST00000230480 CCNJLQ8IV13 435 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 DNAAF3Q8N9W5 541 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 MCUQ8NE86 351 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-201ENST00000230480 GDAP1Q8TB36 358 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 GLMNQ92990 594 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 ATXN7L3BQ96GX2 97 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 PWWP2AQ96N64 755 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 NUDT22Q9BRQ3 303 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 SEMA6CQ9H3T2 930 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 DNMT3AQ9Y6K1 912 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-201ENST00000230480 SLC30A1Q9Y6M5 507 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 CHD6Q8TD26 2715 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 TMEM8BA6NDV4 472 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 MGAT4DA6NG13 374 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 OR52A4PA6NMU1 304 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 D6RAR5 112 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 E7EVH7 732 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 TLX3O43711 291 aaPredicted RBP13.47□□□□□ -0.25
VEGFA-201ENST00000230480 F7P08709 466 aaPredicted RBP13.47□□□□□ -0.25
VEGFA-201ENST00000230480 ATP1B2P14415 290 aaPredicted RBP13.47□□□□□ -0.25
VEGFA-201ENST00000230480 ITGALP20701 1170 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 TNNT3P45378 269 aaPredicted RBP13.47□□□□□ -0.25
VEGFA-201ENST00000230480 PRLHRP49683 370 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 CDK16Q00536 496 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 CYP4F3Q08477 520 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 PTK6Q13882 451 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 SKIDA1Q1XH10 827 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 ZRANB3Q5FWF4 1079 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 CAPRIN2Q6IMN6 1127 aaKnown RBP13.47□□□□□ -0.25
VEGFA-201ENST00000230480 SYT10Q6XYQ8 523 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 TRAPPC5Q8IUR0 188 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 IGDCC3Q8IVU1 814 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 GPR150Q8NGU9 434 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 OR2L2Q8NH16 312 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 LKAAEAR1Q8TD35 194 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 ANKRD7Q92527 254 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 PEX13Q92968 403 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 SERPINB12Q96P63 405 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 INSM2Q96T92 566 aaPredicted RBP13.47□□□□□ -0.25
VEGFA-201ENST00000230480 TBC1D10AQ9BXI6 508 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 FOXP3Q9BZS1 431 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 RDH14Q9HBH5 336 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 SARS2Q9NP81 518 aaKnown RBP13.47□□□□□ -0.25
VEGFA-201ENST00000230480 PDP2Q9P2J9 529 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 CPNE7Q9UBL6 633 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 DKK4Q9UBT3 224 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 CRLS1Q9UJA2 301 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 SOX13Q9UN79 622 aa13.47□□□□□ -0.25
VEGFA-201ENST00000230480 ZCWPW2A0A1B0GU75 182 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 CTAGE9A4FU28 777 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 GOLGA8MH3BSY2 632 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 BANF1O75531 89 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 TCEA3O75764 348 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 KRT37O76014 449 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 PDHA2P29803 388 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 ACTN2P35609 894 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 C16orf72Q14CZ0 275 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 INSCQ1MX18 579 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 AMZ2Q86W34 360 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 KLHL7Q8IXQ5 586 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 OR6C4Q8NGE1 309 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 ULK4Q96C45 1275 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 RMDN2Q96LZ7 410 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 NAP1L3Q99457 506 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-201ENST00000230480 COPS8Q99627 209 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 TRIM51Q9BSJ1 452 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 NRSN2Q9GZP1 204 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 MRM3Q9HC36 420 aaKnown RBP13.46□□□□□ -0.25
VEGFA-201ENST00000230480 SLC40A1Q9NP59 571 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 ASCL3Q9NQ33 180 aa13.46□□□□□ -0.25
VEGFA-201ENST00000230480 ITPR1Q14643 2758 aa13.46□□□□□ -0.26
VEGFA-201ENST00000230480 ADAMTS20P59510 1910 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 KIR2DS5A0A0G2JLQ3 304 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 A0A0G2JNG1 304 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 KIR2DS3K7RE56 304 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 DNALI1O14645 258 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-201ENST00000230480 CTIFO43310 598 aaKnown RBP13.45□□□□□ -0.26
VEGFA-201ENST00000230480 TPBGLP0DKB5 382 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 MLNP12872 115 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 MSH3P20585 1137 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 ALDH4A1P30038 563 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 GPR3P46089 330 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 LMAN1P49257 510 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 GABPB1Q06547 395 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-201ENST00000230480 KIR2DS5Q14953 304 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 SEPT7Q16181 437 aaKnown RBP13.45□□□□□ -0.26
VEGFA-201ENST00000230480 RPE65Q16518 533 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 ZNF789Q5FWF6 425 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 DUS1LQ6P1R4 473 aaKnown RBP13.45□□□□□ -0.26
VEGFA-201ENST00000230480 PACS1Q6VY07 963 aa13.45□□□□□ -0.26
VEGFA-201ENST00000230480 NAPRTQ6XQN6 538 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms