RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.66□□□□□ -0.22
HCFC2-201ENST00000229330 CMASQ8NFW8 434 aaPredicted RBP13.66□□□□□ -0.22
HCFC2-201ENST00000229330 ZUFSPQ96AP4 578 aa13.66□□□□□ -0.22
HCFC2-201ENST00000229330 CDK5RAP1Q96SZ6 601 aaKnown RBP13.66□□□□□ -0.22
HCFC2-201ENST00000229330 SLC25A13Q9UJS0 675 aa13.66□□□□□ -0.22
HCFC2-201ENST00000229330 RPP40O75818 363 aaKnown RBP13.66□□□□□ -0.22
HCFC2-201ENST00000229330 GRIA1P42261 906 aa13.66□□□□□ -0.22
HCFC2-201ENST00000229330 INTS6LQ5JSJ4 861 aaKnown RBP13.66□□□□□ -0.22
HCFC2-201ENST00000229330 GPR153Q6NV75 609 aa13.66□□□□□ -0.22
HCFC2-201ENST00000229330 ELMOD2Q8IZ81 293 aa13.66□□□□□ -0.22
HCFC2-201ENST00000229330 COPS5Q92905 334 aa13.66□□□□□ -0.22
HCFC2-201ENST00000229330 PHOX2BQ99453 314 aa13.66□□□□□ -0.22
HCFC2-201ENST00000229330 RAB23Q9ULC3 237 aa13.66□□□□□ -0.22
HCFC2-201ENST00000229330 IRAK3Q9Y616 596 aa13.66□□□□□ -0.22
HCFC2-201ENST00000229330 TMEM233B4DJY2 109 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 AKR1A1P14550 325 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 MAZP56270 477 aaKnown RBP13.65□□□□□ -0.22
HCFC2-201ENST00000229330 BCL2L1Q07817 233 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 ANKRD13BQ86YJ7 626 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 ARRDC4Q8NCT1 418 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 SLC13A3Q8WWT9 602 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 USP7Q93009 1102 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 DUSP16Q9BY84 665 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 TAS2R7Q9NYW3 318 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 DTLQ9NZJ0 730 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 B4GALT5O43286 388 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 SERPINB7O75635 380 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 TOP3BO95985 862 aaKnown RBP13.65□□□□□ -0.22
HCFC2-201ENST00000229330 FAUP35544 74 aaKnown RBP13.65□□□□□ -0.22
HCFC2-201ENST00000229330 USP30Q70CQ3 517 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 GPR156Q8NFN8 814 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 C9orf43Q8TAL5 461 aaPredicted RBP13.65□□□□□ -0.22
HCFC2-201ENST00000229330 POF1BQ8WVV4 589 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 TMEM169Q96HH4 297 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 ADAMTS10Q9H324 1103 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 CNOT11Q9UKZ1 510 aaKnown RBP13.65□□□□□ -0.22
HCFC2-201ENST00000229330 ST3GAL5Q9UNP4 418 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 GIT1Q9Y2X7 761 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 NEMP2A6NFY4 417 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 PRAMEF1O95521 474 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 CATP04040 527 aaKnown RBP13.65□□□□□ -0.22
HCFC2-201ENST00000229330 DARSP14868 501 aaKnown RBP13.65□□□□□ -0.22
HCFC2-201ENST00000229330 RHAGQ02094 409 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 TGM3Q08188 693 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 SLC9A5Q14940 896 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 SNAPC1Q16533 368 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 FBXO43Q4G163 708 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 XKR6Q5GH73 641 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 CPTPQ5TA50 214 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.65□□□□□ -0.22
HCFC2-201ENST00000229330 KRT77Q7Z794 578 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 TAF8Q7Z7C8 310 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 LDB1Q86U70 411 aaPredicted RBP13.65□□□□□ -0.22
HCFC2-201ENST00000229330 FAM35AQ86V20 835 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 PHC2Q8IXK0 858 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 ZNF655Q8N720 491 aaPredicted RBP13.65□□□□□ -0.22
HCFC2-201ENST00000229330 ATL1Q8WXF7 558 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 UTP4Q969X6 686 aaKnown RBP13.65□□□□□ -0.22
HCFC2-201ENST00000229330 CRELD1Q96HD1 420 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 HEPHQ9BQS7 1158 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 MMP27Q9H306 513 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 AKTIPQ9H8T0 292 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 STARD7Q9NQZ5 370 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 RNF19AQ9NV58 838 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 DLG5Q8TDM6 1919 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 RLN1P04808 185 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 CDK4P11802 303 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 YWHAQP27348 245 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 DCDC1P59894 354 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 MAB21L1Q13394 359 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 DCBLD1Q8N8Z6 715 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 QRFPRQ96P65 431 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 ZNF607Q96SK3 696 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 RPF2Q9H7B2 306 aaKnown RBP13.65□□□□□ -0.22
HCFC2-201ENST00000229330 MALT1Q9UDY8 824 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 CLEC4AQ9UMR7 237 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 PCDHB5Q9Y5E4 795 aa13.65□□□□□ -0.22
HCFC2-201ENST00000229330 IGLV3-22A0A075B6J6 115 aa13.65□□□□□ -0.23
HCFC2-201ENST00000229330 RFPL1O75677 317 aa13.65□□□□□ -0.23
HCFC2-201ENST00000229330 OR4F21O95013 312 aa13.65□□□□□ -0.23
HCFC2-201ENST00000229330 OR5F1O95221 314 aa13.65□□□□□ -0.23
HCFC2-201ENST00000229330 IFNA16P05015 189 aa13.65□□□□□ -0.23
HCFC2-201ENST00000229330 NR2F1P10589 423 aa13.65□□□□□ -0.23
HCFC2-201ENST00000229330 IMPDH1P20839 514 aa13.65□□□□□ -0.23
HCFC2-201ENST00000229330 FBXO48Q5FWF7 155 aa13.65□□□□□ -0.23
HCFC2-201ENST00000229330 TRMT11Q7Z4G4 463 aaKnown RBP13.65□□□□□ -0.23
HCFC2-201ENST00000229330 PYROXD2Q8N2H3 581 aa13.65□□□□□ -0.23
HCFC2-201ENST00000229330 HDAC2Q92769 488 aaKnown RBP13.65□□□□□ -0.23
HCFC2-201ENST00000229330 H7C4K7 107 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 SLC2A2P11168 524 aaPredicted RBP13.64□□□□□ -0.23
HCFC2-201ENST00000229330 MC4RP32245 332 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 PSEN2P49810 448 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 ZNF45Q02386 682 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 SULT2A1Q06520 285 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 RFTN1Q14699 578 aaPredicted RBP13.64□□□□□ -0.23
HCFC2-201ENST00000229330 ZNF181Q2M3W8 571 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 KIAA0319LQ8IZA0 1049 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 APOLD1Q96LR9 279 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 ZNF717Q9BY31 904 aaPredicted RBP13.64□□□□□ -0.23
HCFC2-201ENST00000229330 AMBNQ9NP70 447 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms