RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 ECHDC3Q96DC8 303 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 DUS3LQ96G46 650 aaKnown RBP16.64■□□□□ 0.25
GAPDH-201ENST00000229239 SLC46A2Q9BY10 475 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 CPEB1Q9BZB8 566 aaKnown RBP16.64■□□□□ 0.25
GAPDH-201ENST00000229239 FBRSL1Q9HCM7 1045 aaKnown RBP16.64■□□□□ 0.25
GAPDH-201ENST00000229239 IL26Q9NPH9 171 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 TMEM181Q9P2C4 612 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 INTS6Q9UL03 887 aaKnown RBP16.64■□□□□ 0.25
GAPDH-201ENST00000229239 LZTS1Q9Y250 596 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 FNDC3AQ9Y2H6 1198 aaKnown RBP16.64■□□□□ 0.25
GAPDH-201ENST00000229239 ATG2AQ2TAZ0 1938 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 DENND4CQ5VZ89 1909 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 AGAP14A8MT82 685 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 E7ENX8 843 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 SRCP12931 536 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 HGFP14210 728 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 EPHA5P54756 1037 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 MS4A2Q01362 244 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 RBBP7Q16576 425 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 PAOXQ6QHF9 649 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 TPGS1Q6ZTW0 290 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 TPRG1Q6ZUI0 275 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 USP45Q70EL2 814 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 MYO1HQ8N1T3 1032 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 PCDH20Q8N6Y1 951 aaKnown RBP16.63■□□□□ 0.25
GAPDH-201ENST00000229239 GOLM1Q8NBJ4 401 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 PDPRQ8NCN5 879 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 OR6K2Q8NGY2 324 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 SPPL3Q8TCT6 385 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 MICAL1Q8TDZ2 1067 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 GATA6Q92908 595 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 HLA-CQ95604 372 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 Q9H521 79 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 SARS2Q9NP81 518 aaKnown RBP16.63■□□□□ 0.25
GAPDH-201ENST00000229239 LATS2Q9NRM7 1088 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 ZNF106Q9H2Y7 1883 aaKnown RBP16.63■□□□□ 0.25
GAPDH-201ENST00000229239 MYO7AQ13402 2215 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 EIF3FO00303 357 aaPredicted RBP16.63■□□□□ 0.25
GAPDH-201ENST00000229239 ANGPT2O15123 496 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 GLUD1P00367 558 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 BPIP17213 487 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 HSPA13P48723 471 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 DMC1Q14565 340 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 MYLK3Q32MK0 819 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 MAP7D1Q3KQU3 841 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 TTLL9Q3SXZ7 439 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 DGKKQ5KSL6 1271 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 MINDY1Q8N5J2 469 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 ICA1LQ8NDH6 482 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 MIEF2Q96C03 454 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 SCRN2Q96FV2 425 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 ZNF641Q96N77 438 aaPredicted RBP16.63■□□□□ 0.25
GAPDH-201ENST00000229239 KCNA7Q96RP8 456 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 CORO1BQ9BR76 489 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 EFHD1Q9BUP0 239 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 CIPCQ9C0C6 399 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 PDP2Q9P2J9 529 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 CD300AQ9UGN4 299 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 ZMYM5Q9UJ78 669 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 CRLS1Q9UJA2 301 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 SLC25A13Q9UJS0 675 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 CLEC4EQ9ULY5 219 aa16.63■□□□□ 0.25
GAPDH-201ENST00000229239 PRSS51A0A1B0GVH4 220 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 GRXCR2A6NFK2 248 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 NCF1BA6NI72 391 aaPredicted RBP16.62■□□□□ 0.25
GAPDH-201ENST00000229239 NCF1CA8MVU1 366 aaPredicted RBP16.62■□□□□ 0.25
GAPDH-201ENST00000229239 CLDN7O95471 211 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 NPPAP01160 153 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 CAPNS1P04632 268 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 C8BP07358 591 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 LINC00032P0C843 101 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 CBSLP0DN79 551 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 NCF1P14598 390 aaPredicted RBP16.62■□□□□ 0.25
GAPDH-201ENST00000229239 UQCRBP14927 111 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 ARSAP15289 507 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 CBSP35520 551 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 AGTR2P50052 363 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 TFF2Q03403 129 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 CAMK1Q14012 370 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 GRB7Q14451 532 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 CDKL4Q5MAI5 379 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 C22orf39Q6P5X5 142 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 SBSNQ6UWP8 590 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 PLPP6Q8IY26 295 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 MCCC1Q96RQ3 725 aaPredicted RBP16.62■□□□□ 0.25
GAPDH-201ENST00000229239 FAM126AQ9BYI3 521 aaPredicted RBP16.62■□□□□ 0.25
GAPDH-201ENST00000229239 TRIM15Q9C019 465 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 NSUN3Q9H649 340 aaKnown RBP16.62■□□□□ 0.25
GAPDH-201ENST00000229239 AIG1Q9NVV5 245 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 PLK2Q9NYY3 685 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 PACSIN3Q9UKS6 424 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 CNOT11Q9UKZ1 510 aaKnown RBP16.62■□□□□ 0.25
GAPDH-201ENST00000229239 OARD1Q9Y530 152 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 GPR45Q9Y5Y3 372 aa16.62■□□□□ 0.25
GAPDH-201ENST00000229239 CSPG5O95196 566 aa16.61■□□□□ 0.25
GAPDH-201ENST00000229239 MSH3P20585 1137 aa16.61■□□□□ 0.25
GAPDH-201ENST00000229239 PEX2P28328 305 aa16.61■□□□□ 0.25
GAPDH-201ENST00000229239 MRPS22P82650 360 aaKnown RBP16.61■□□□□ 0.25
GAPDH-201ENST00000229239 RHDQ02161 417 aa16.61■□□□□ 0.25
GAPDH-201ENST00000229239 MED21Q13503 144 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms