RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ANGPTL8Q6UXH0 198 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 ZC3H7AQ8IWR0 971 aaKnown RBP14.9□□□□□ -0.02
EFNB1-201ENST00000204961 RNF168Q8IYW5 571 aaPredicted RBP14.9□□□□□ -0.02
EFNB1-201ENST00000204961 DBF4BQ8NFT6 615 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 ITFG1Q8TB96 612 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 ULK4Q96C45 1275 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 ISOC1Q96CN7 298 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 IPPKQ9H8X2 491 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 MYO10Q9HD67 2058 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 C2orf78A6NCI8 922 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 DUSP11O75319 330 aaKnown RBP14.9□□□□□ -0.02
EFNB1-201ENST00000204961 ABCB1P08183 1280 aaPredicted RBP14.9□□□□□ -0.02
EFNB1-201ENST00000204961 VARSP26640 1264 aaKnown RBP14.9□□□□□ -0.02
EFNB1-201ENST00000204961 RPS9P46781 194 aaKnown RBP14.9□□□□□ -0.02
EFNB1-201ENST00000204961 CAP1Q01518 475 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 CARM1Q86X55 608 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 UMODL1-AS1Q8N2C9 162 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 OR4F6Q8NGB9 312 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 GIPC3Q8TF64 312 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 RBM38Q9H0Z9 239 aaKnown RBP14.9□□□□□ -0.02
EFNB1-201ENST00000204961 AMBNQ9NP70 447 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.9□□□□□ -0.02
EFNB1-201ENST00000204961 NYNRINQ9P2P1 1898 aaKnown RBP14.9□□□□□ -0.02
EFNB1-201ENST00000204961 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.89□□□□□ -0.03
EFNB1-201ENST00000204961 C8BP07358 591 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 PKMP14618 531 aaKnown RBP14.89□□□□□ -0.03
EFNB1-201ENST00000204961 AGXTP21549 392 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 ZXDBP98169 803 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 ZNF177Q13360 481 aaPredicted RBP14.89□□□□□ -0.03
EFNB1-201ENST00000204961 RFLNAQ6ZTI6 216 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 TFAP2CQ92754 450 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 FAM162AQ96A26 154 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 ZNF510Q9Y2H8 683 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 OAS3Q9Y6K5 1087 aaKnown RBP14.89□□□□□ -0.03
EFNB1-201ENST00000204961 MYOFQ9NZM1 2061 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 XPNPEP2O43895 674 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 NDST3O95803 873 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 HSPA1AP0DMV8 641 aaKnown RBP14.89□□□□□ -0.03
EFNB1-201ENST00000204961 HSPA1BP0DMV9 641 aaKnown RBP14.89□□□□□ -0.03
EFNB1-201ENST00000204961 WEE1P30291 646 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 CORO1AP31146 461 aaKnown RBP14.89□□□□□ -0.03
EFNB1-201ENST00000204961 CYP2C18P33260 490 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 HSPA13P48723 471 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 RAB39AQ14964 217 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 MAPK11Q15759 364 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 ZNF554Q86TJ5 538 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 SFRP1Q8N474 314 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 TMBIM1Q969X1 311 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 TMEM125Q96AQ2 219 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 FBXO44Q9H4M3 255 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 IKZF5Q9H5V7 419 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 CCM2LQ9NUG4 571 aaPredicted RBP14.89□□□□□ -0.03
EFNB1-201ENST00000204961 PNMA8BQ9ULN7 279 aaPredicted RBP14.89□□□□□ -0.03
EFNB1-201ENST00000204961 MED16Q9Y2X0 877 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 PIKFYVEQ9Y2I7 2098 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 MROH6A6NGR9 719 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 TBKBP1A7MCY6 615 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 DLGAP1O14490 977 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 CACNG3O60359 315 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 KLKB1P03952 638 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 MTHFRP42898 656 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 PHEXP78562 749 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 HSPA14Q0VDF9 509 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 RFTN1Q14699 578 aaPredicted RBP14.89□□□□□ -0.03
EFNB1-201ENST00000204961 SETMARQ53H47 684 aaPredicted RBP14.89□□□□□ -0.03
EFNB1-201ENST00000204961 BLOC1S3Q6QNY0 202 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 BBS5Q8N3I7 341 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 DTWD1Q8N5C7 304 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 LKAAEAR1Q8TD35 194 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 FRS2Q8WU20 508 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 WWOXQ9NZC7 414 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 LRFN2Q9ULH4 789 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 A0A0G2JMZ2 1700 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 LRRC37A2A6NM11 1700 aa14.89□□□□□ -0.03
EFNB1-201ENST00000204961 SHMT2P34897 504 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 RHOAP61586 193 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 ITGADQ13349 1161 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 APOFQ13790 326 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 TGFBIQ15582 683 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 SPANXN4Q5MJ08 99 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 ANKRD26P1Q6NSI1 321 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 GTF3C2Q8WUA4 911 aaPredicted RBP14.88□□□□□ -0.03
EFNB1-201ENST00000204961 ELMO1Q92556 727 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 CENPNQ96H22 339 aaPredicted RBP14.88□□□□□ -0.03
EFNB1-201ENST00000204961 EBPLQ9BY08 206 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 SMG9Q9H0W8 520 aaKnown RBP14.88□□□□□ -0.03
EFNB1-201ENST00000204961 ASB8Q9H765 288 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 TMEM248Q9NWD8 314 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 VAPAQ9P0L0 249 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 IFT80Q9P2H3 777 aaPredicted RBP14.88□□□□□ -0.03
EFNB1-201ENST00000204961 SQORQ9Y6N5 450 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 CNTRLQ7Z7A1 2325 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 MITFO75030 526 aaPredicted RBP14.88□□□□□ -0.03
EFNB1-201ENST00000204961 EMP3P54852 163 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 OCA2Q04671 838 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 MBTPS1Q14703 1052 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 PCBP1Q15365 356 aaKnown RBP eCLIP14.88□□□□□ -0.03
EFNB1-201ENST00000204961 PHKG1Q16816 387 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 MFSD14CQ5VZR4 134 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 FAM180BQ6P0A1 224 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms