RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 SEPT7Q16181 437 aaKnown RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 LONRF2Q1L5Z9 754 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 NKAIN2Q5VXU1 208 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 TMEM220Q6QAJ8 160 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 C19orf48Q6RUI8 117 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 ZNF574Q6ZN55 896 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 LRRC69Q6ZNQ3 347 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 AMZ2Q86W34 360 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 NBEAQ8NFP9 2946 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 OR4D9Q8NGE8 314 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 OR10G6Q8NH81 332 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 HNRNPLLQ8WVV9 542 aaKnown RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 TMEM159Q96B96 161 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 ULK4Q96C45 1275 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 AHCYL2Q96HN2 611 aaKnown RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 ZNF514Q96K75 400 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 DNAJC1Q96KC8 554 aaKnown RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 PIH1D1Q9NWS0 290 aaKnown RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 SCHIP1Q9P0W5 487 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 PAK5Q9P286 719 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 CRLS1Q9UJA2 301 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 DRG1Q9Y295 367 aaKnown RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 LOXL2Q9Y4K0 774 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 IGHV5-10-1A0A0J9YXX1 117 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 CDRT15L2A8MXV6 281 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 E7EVH7 732 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 H7C0S8 307 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 CCL22O00626 93 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 POP7O75817 140 aaKnown RBP14.78□□□□□ -0.04
PHGDH-231ENST00000641939 SUN1O94901 812 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 TNFSF15O95150 251 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 ITGA2BP08514 1039 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 ETS1P14921 441 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 ITGALP20701 1170 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 RPL10P27635 214 aaKnown RBP14.78□□□□□ -0.04
PHGDH-231ENST00000641939 PPM1FP49593 454 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-231ENST00000641939 DMPKQ09013 629 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 CDH17Q12864 832 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 SEMA5AQ13591 1074 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 AGAP9Q5VTM2 703 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 ABRAXAS1Q6UWZ7 409 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 WASH2PQ6VEQ5 465 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 SNX20Q7Z614 316 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 PRUNE1Q86TP1 453 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 DNAAF3Q8N9W5 541 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 GLIS1Q8NBF1 620 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 ZNF248Q8NDW4 579 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 OR52K1Q8NGK4 314 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 STYXQ8WUJ0 223 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 CMKLR1Q99788 373 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 ZMYND15Q9H091 742 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 WASH6PQ9NQA3 447 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 RAB6BQ9NRW1 208 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 HOMER3Q9NSC5 361 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 NLE1Q9NVX2 485 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-231ENST00000641939 JRKLQ9Y4A0 524 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 SLC30A1Q9Y6M5 507 aa14.78□□□□□ -0.04
PHGDH-231ENST00000641939 HGSO14964 777 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-231ENST00000641939 ZSCAN12O43309 604 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 DUX1O43812 170 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 GAS8O95995 478 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 VIPP01282 170 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 JMJD7P0C870 316 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 RALBP11234 206 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 HGFP14210 728 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 HOXB3P14651 431 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-231ENST00000641939 BRAFP15056 766 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 MC4RP32245 332 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 CSF2RBP32927 897 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 SLC19A1P41440 591 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 ABCG1P45844 678 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 LIMK2P53671 638 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 EPHA4P54764 986 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 DRG2P55039 364 aaKnown RBP14.77□□□□□ -0.05
PHGDH-231ENST00000641939 CFHR1Q03591 330 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 CCDC173Q0VFZ6 552 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 TRA2AQ13595 282 aaKnown RBP eCLIP14.77□□□□□ -0.05
PHGDH-231ENST00000641939 COL28A1Q2UY09 1125 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 GPR33Q49SQ1 333 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 FNBP1LQ5T0N5 605 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 TMEM71Q6P5X7 295 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 C4orf22Q6V702 233 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 PPP1R21Q6ZMI0 780 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 DET1Q7L5Y6 550 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 CLEC14AQ86T13 490 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 TRIM48Q8IWZ4 208 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 REXO1L1PQ8IX06 675 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 NXPE1Q8N323 547 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 HEXDCQ8WVB3 486 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 SGF29Q96ES7 293 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 DCUN1D1Q96GG9 259 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 CCDC74BQ96LY2 380 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 KCNF1Q9H3M0 494 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 EPB41L1Q9H4G0 881 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 FAM96AQ9H5X1 160 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 UCK1Q9HA47 277 aa14.77□□□□□ -0.05
PHGDH-231ENST00000641939 AKAP7Q9P0M2 348 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-231ENST00000641939 ZNF624Q9P2J8 865 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-231ENST00000641939 PISDQ9UG56 409 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms