RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 IL12RB1P42701 662 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 PKNOX1P55347 436 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 MRPS21P82921 87 aaKnown RBP9.6□□□□□ -0.87
PHGDH-215ENST00000641371 GTF2H3Q13889 308 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 ACOX1Q15067 660 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 AGERQ15109 404 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 ZNF776Q68DI1 518 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-215ENST00000641371 EPGNQ6UW88 154 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 NAPRTQ6XQN6 538 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 MTDHQ86UE4 582 aaKnown RBP9.6□□□□□ -0.87
PHGDH-215ENST00000641371 CPNE9Q8IYJ1 553 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 CHPFQ8IZ52 775 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 ARHGAP24Q8N264 748 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 ZNF781Q8N8C0 355 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 ZNF513Q8N8E2 541 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-215ENST00000641371 PTGR2Q8N8N7 351 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-215ENST00000641371 SIDT2Q8NBJ9 832 aaKnown RBP9.6□□□□□ -0.87
PHGDH-215ENST00000641371 PDPRQ8NCN5 879 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 ASZ1Q8WWH4 475 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 PPM1EQ8WY54 764 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 GLYATL1Q969I3 302 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 FUBP1Q96AE4 644 aaKnown RBP9.6□□□□□ -0.87
PHGDH-215ENST00000641371 PTERQ96BW5 349 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 AP2M1Q96CW1 435 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 COQ10AQ96MF6 247 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 TMEM237Q96Q45 408 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 FAM129BQ96TA1 746 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 C1QTNF7Q9BXJ2 289 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 NUSAP1Q9BXS6 441 aaKnown RBP9.6□□□□□ -0.87
PHGDH-215ENST00000641371 PLA2G2FQ9BZM2 168 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 MYLK2Q9H1R3 596 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 RSPH9Q9H1X1 276 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-215ENST00000641371 RASSF4Q9H2L5 321 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 PRSS16Q9NQE7 514 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 GTSE1Q9NYZ3 720 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 CDYLQ9Y232 598 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 NUMBLQ9Y6R0 609 aa9.6□□□□□ -0.87
PHGDH-215ENST00000641371 FCHO1O14526 889 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 VEGFDO43915 354 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 NUAK1O60285 661 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 LZTS3O60299 673 aaPredicted RBP9.59□□□□□ -0.87
PHGDH-215ENST00000641371 ATG13O75143 517 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 LYPLA1O75608 230 aaPredicted RBP9.59□□□□□ -0.87
PHGDH-215ENST00000641371 SUPT7LO94864 414 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 TRIM16O95361 564 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 CHEK2O96017 543 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 RPS17P08708 135 aaKnown RBP9.59□□□□□ -0.87
PHGDH-215ENST00000641371 UGT1A6P19224 532 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 AOC1P19801 751 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 CYP2A7P20853 494 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 UGT1A1P22309 533 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 UGT1A4P22310 534 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 SERPINB3P29508 390 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 NTSR1P30989 418 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 UGT1A3P35503 534 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 UGT1A5P35504 534 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 LTBRP36941 435 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 MAGEA9P43362 315 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 LIG3P49916 1009 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 HNMTP50135 292 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 IDH3AP50213 366 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 INHBCP55103 352 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 AP1S2P56377 157 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 GRSF1Q12849 480 aaKnown RBP eCLIP9.59□□□□□ -0.87
PHGDH-215ENST00000641371 LCP2Q13094 533 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 GBX1Q14549 363 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 PCBP2Q15366 365 aaKnown RBP eCLIP9.59□□□□□ -0.87
PHGDH-215ENST00000641371 TGFBIQ15582 683 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 OR4D1Q15615 310 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 TSNQ15631 228 aaKnown RBP9.59□□□□□ -0.87
PHGDH-215ENST00000641371 PFKFB4Q16877 469 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 EGFLAMQ63HQ2 1017 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 SULT1C3Q6IMI6 304 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 NEK5Q6P3R8 708 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 EP400NLQ6ZTU2 488 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 Q6ZVL8 140 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 HSD11B1LQ7Z5J1 315 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 CUZD1Q86UP6 607 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 CLYBLQ8N0X4 340 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 OR56A4Q8NGH8 313 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 OR2T3Q8NH03 318 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 ACTRT2Q8TDY3 377 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 EEF1AKMT1Q8WVE0 214 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 ARRDC3Q96B67 414 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 KLHL29Q96CT2 875 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 CMTM5Q96DZ9 223 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 NUS1Q96E22 293 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 PHF21BQ96EK2 531 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 NSL1Q96IY1 281 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 GABRG3Q99928 467 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 C20orf27Q9GZN8 174 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 ABCG8Q9H221 673 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 GSTO2Q9H4Y5 243 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 COG4Q9H9E3 785 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 SARS2Q9NP81 518 aaKnown RBP9.59□□□□□ -0.87
PHGDH-215ENST00000641371 TCF7L2Q9NQB0 619 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 CD274Q9NZQ7 290 aa9.59□□□□□ -0.87
PHGDH-215ENST00000641371 MARCOQ9UEW3 520 aaPredicted RBP9.59□□□□□ -0.87
PHGDH-215ENST00000641371 TICRRQ7Z2Z1 1910 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 C17orf113A0A1B0GUU1 675 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms