RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 FIBINQ8TAL6 211 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 WRAP53Q9BUR4 548 aaKnown RBP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 MRPL1Q9BYD6 325 aaKnown RBP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 MMADHCQ9H3L0 296 aaPredicted RBP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 BRD9Q9H8M2 597 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 EFCAB1Q9HAE3 211 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 FARSBQ9NSD9 589 aaKnown RBP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 EGFL7Q9UHF1 273 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 POLG2Q9UHN1 485 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 STOML2Q9UJZ1 356 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 MRPS23Q9Y3D9 190 aaKnown RBP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 SDK1Q7Z5N4 2213 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 TPST1O60507 370 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 PSMC3P17980 439 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 VHLP40337 213 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 CLCN7P51798 805 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 AP1S1P61966 158 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 SLC7A9P82251 487 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 UGT3A2Q3SY77 523 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 SWT1Q5T5J6 900 aaKnown RBP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 TRIM74Q86UV6 250 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 C12orf40Q86WS4 652 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 RP9Q8TA86 221 aaKnown RBP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 IRF7Q92985 503 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 SPATA16Q9BXB7 569 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 DERL2Q9GZP9 239 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 SUV39H2Q9H5I1 410 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 TFB2MQ9H5Q4 396 aaKnown RBP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 COPS7BQ9H9Q2 264 aaPredicted RBP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 STX18Q9P2W9 335 aaKnown RBP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 COQ6Q9Y2Z9 468 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 OAS3Q9Y6K5 1087 aaKnown RBP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 UPK3BL1B0FP48 263 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 UPK3BL2E5RIL1 263 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 SLCO1B7G3V0H7 640 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 RFXAPO00287 272 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 LEFTY1O75610 366 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 ETV3P41162 512 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 STX1BP61266 288 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 SNRPD1P62314 119 aaKnown RBP12.59□□□□□ -0.39
SPIN3-243ENST00000640717 PTSQ03393 145 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 REP15Q6BDI9 236 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 LETMD1Q6P1Q0 360 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 CLHC1Q8NHS4 586 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 ACDQ96AP0 544 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 S100A14Q9HCY8 104 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 SLAMF8Q9P0V8 285 aa12.59□□□□□ -0.39
SPIN3-243ENST00000640717 LINC01553A4QN01 128 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 MRASO14807 208 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 CLGNO14967 610 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 MAP3K7O43318 606 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 CAPN1P07384 714 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 ZCCHC18P0CG32 403 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 ZNF7P17097 686 aaPredicted RBP12.58□□□□□ -0.4
SPIN3-243ENST00000640717 RFC2P35250 354 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 PTGER3P43115 390 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 RECQLP46063 649 aaPredicted RBP12.58□□□□□ -0.4
SPIN3-243ENST00000640717 PSME3P61289 254 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 LCP2Q13094 533 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 MTA1Q13330 715 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 IL27RAQ6UWB1 636 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 RETREG3Q86VR2 466 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 FUNDC1Q8IVP5 155 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 LMNTD2Q8IXW0 634 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 LILRA3Q8N6C8 439 aaPredicted RBP12.58□□□□□ -0.4
SPIN3-243ENST00000640717 PPFIBP2Q8ND30 876 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 OR2T11Q8NH01 316 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 DNAJB14Q8TBM8 379 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 METTL6Q8TCB7 284 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.58□□□□□ -0.47e-6■■■■■ 27.5
SPIN3-243ENST00000640717 RAD9AQ99638 391 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 C1orf21Q9H246 121 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 MEAF6Q9HAF1 191 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 MAGEE1Q9HCI5 957 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 ZFP14Q9HCL3 533 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 OTOL1A6NHN0 477 aaPredicted RBP12.58□□□□□ -0.4
SPIN3-243ENST00000640717 KPNA3O00505 521 aaPredicted RBP12.58□□□□□ -0.4
SPIN3-243ENST00000640717 PTPN2P17706 415 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 SLC7A2P52569 658 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 ERVPABLB-1P60509 514 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 HMGCS1Q01581 520 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 C9orf50Q5SZB4 431 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 LARP4Q71RC2 724 aaKnown RBP eCLIP12.58□□□□□ -0.4
SPIN3-243ENST00000640717 LCA5Q86VQ0 697 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 GALNT4Q8N4A0 578 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 RNF175Q8N4F7 328 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 SPHK2Q9NRA0 654 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 SLC25A13Q9UJS0 675 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 ANGPTL3Q9Y5C1 460 aa12.58□□□□□ -0.4
SPIN3-243ENST00000640717 NUP214P35658 2090 aaPredicted RBP12.58□□□□□ -0.4
SPIN3-243ENST00000640717 TANC1Q9C0D5 1861 aa12.57□□□□□ -0.4
SPIN3-243ENST00000640717 PFDN6O15212 129 aa12.57□□□□□ -0.4
SPIN3-243ENST00000640717 WASP42768 502 aa12.57□□□□□ -0.4
SPIN3-243ENST00000640717 MTTPP55157 894 aa12.57□□□□□ -0.4
SPIN3-243ENST00000640717 C1orf53Q5VUE5 145 aa12.57□□□□□ -0.4
SPIN3-243ENST00000640717 PGM2L1Q6PCE3 622 aa12.57□□□□□ -0.4
SPIN3-243ENST00000640717 DNAJC14Q6Y2X3 702 aaPredicted RBP12.57□□□□□ -0.4
SPIN3-243ENST00000640717 VRK3Q8IV63 474 aa12.57□□□□□ -0.4
SPIN3-243ENST00000640717 SLC22A15Q8IZD6 547 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms