RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 ABCC11Q96J66 1382 aa3.15□□□□□ -1.9
ATM-230ENST00000640388 IGHV4OR15-8A0A075B7B6 117 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 A0A1B0GVC2 190 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 RFPL2O75678 378 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 F7P08709 466 aaPredicted RBP3.15□□□□□ -1.91
ATM-230ENST00000640388 UBL4AP11441 157 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 ATP1A3P13637 1013 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 DDX5P17844 614 aaKnown RBP3.15□□□□□ -1.91
ATM-230ENST00000640388 MAOAP21397 527 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 EPHA8P29322 1005 aaPredicted RBP3.15□□□□□ -1.91
ATM-230ENST00000640388 CDAP32320 146 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 EIF3BP55884 814 aaKnown RBP3.15□□□□□ -1.91
ATM-230ENST00000640388 POU5F1BQ06416 359 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 ZBTB17Q13105 803 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 DRAP1Q14919 205 aaPredicted RBP3.15□□□□□ -1.91
ATM-230ENST00000640388 ALG11Q2TAA5 492 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 GGNBP1Q5YKI7 109 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 FAM122CQ6P4D5 195 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 INO80CQ6PI98 192 aaPredicted RBP3.15□□□□□ -1.91
ATM-230ENST00000640388 CCNI2Q6ZMN8 369 aaPredicted RBP3.15□□□□□ -1.91
ATM-230ENST00000640388 TUBA1AQ71U36 451 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 CUZD1Q86UP6 607 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 SATL1Q86VE3 508 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 SFR1Q86XK3 245 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 WDR63Q8IWG1 891 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 RFLNBQ8N5W9 214 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 SPATA22Q8NHS9 363 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 SECTM1Q8WVN6 248 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 DNASE2BQ8WZ79 361 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 FIG4Q92562 907 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 GTF3C6Q969F1 213 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 SLC41A2Q96JW4 573 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 NR1H4Q96RI1 486 aaPredicted RBP3.15□□□□□ -1.91
ATM-230ENST00000640388 SEC62Q99442 399 aaKnown RBP3.15□□□□□ -1.91
ATM-230ENST00000640388 FAM110AQ9BQ89 295 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 TUBA1CQ9BQE3 449 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 MAF1Q9H063 256 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 PPP1R3EQ9H7J1 279 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 PRKRIP1Q9H875 184 aaPredicted RBP3.15□□□□□ -1.91
ATM-230ENST00000640388 JMJD4Q9H9V9 463 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 KIF9Q9HAQ2 790 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 BRF2Q9HAW0 419 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 LRRC4Q9HBW1 653 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 SLC6A13Q9NSD5 602 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 DONSONQ9NYP3 566 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 C1RLQ9NZP8 487 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 PGAP2Q9UHJ9 254 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 KCNG2Q9UJ96 466 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 HAO1Q9UJM8 370 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 INTS6Q9UL03 887 aaKnown RBP3.15□□□□□ -1.91
ATM-230ENST00000640388 MKLN1Q9UL63 735 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 PSAT1Q9Y617 370 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 CHD9Q3L8U1 2897 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 DDX60LQ5H9U9 1706 aaKnown RBP3.15□□□□□ -1.91
ATM-230ENST00000640388 KDM3AQ9Y4C1 1321 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 CHD7Q9P2D1 2997 aa3.15□□□□□ -1.91
ATM-230ENST00000640388 MYH14Q7Z406 1995 aaKnown RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 CNOT1A5YKK6 2376 aaKnown RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 PIK3C2GO75747 1445 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 HMGB1P1B2RPK0 211 aaPredicted RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 EIF3CLB5ME19 914 aaKnown RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 AKR1B15C9JRZ8 316 aaPredicted RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 ZNF587BE7ETH6 402 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 KRT36O76013 467 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 HOXB5P09067 269 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 BDKRB2P30411 391 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 RAD23BP54727 409 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 CASP6P55212 293 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 HNRNPH2P55795 449 aaKnown RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 DLX5P56178 289 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 SEC61BP60468 96 aaKnown RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 SLC20A2Q08357 652 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 G3BP1Q13283 466 aaKnown RBP eCLIP3.14□□□□□ -1.91
ATM-230ENST00000640388 ITPK1Q13572 414 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 KRT24Q2M2I5 525 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 ALFQ53S48 1182 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 PLEKHA7Q6IQ23 1121 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 CDC73Q6P1J9 531 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 KCTD18Q6PI47 426 aaPredicted RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 TSSK4Q6SA08 328 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 ATF7IPQ6VMQ6 1270 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 MMS22LQ6ZRQ5 1243 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 Q6ZTC4 211 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 GSTA5Q7RTV2 222 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 R3HCC1LQ7Z5L2 792 aaKnown RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 CHERPQ8IWX8 916 aaKnown RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 ODF3L1Q8IXM7 274 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 CCDC13Q8IYE1 715 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 ZNF34Q8IZ26 560 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 NAGSQ8N159 534 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 IL17REQ8NFR9 667 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 METTL6Q8TCB7 284 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 PSPC1Q8WXF1 523 aaKnown RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 CD101Q93033 1021 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 ZKSCAN4Q969J2 545 aaPredicted RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 INPP4AQ96PE3 977 aaPredicted RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 SH3GL2Q99962 352 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 IFIH1Q9BYX4 1025 aaKnown RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 PDCL3Q9H2J4 239 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 EVA1AQ9H8M9 152 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms