RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SEL1L2Q5TEA6 688 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 ARHGAP40Q5TG30 622 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 TMEM164Q5U3C3 297 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 C11orf96Q7Z7L8 435 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 AGBL5Q8NDL9 886 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 ZNF398Q8TD17 642 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 UBL7Q96S82 380 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 TBC1D10AQ9BXI6 508 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 FOXJ2Q9P0K8 574 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 FKBPLQ9UIM3 349 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 ACSL6Q9UKU0 697 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 KCTD3Q9Y597 815 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 ZNF106Q9H2Y7 1883 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 TEX51A0A1B0GUA7 166 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 LILRA5A6NI73 299 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 PRR19A6NJB7 356 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 A8MU76 341 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 C9orf172C9J069 976 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 CRTAMO95727 393 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 VIPP01282 170 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 XRCC1P18887 633 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 SLC19A1P41440 591 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 CTSCP53634 463 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 DRG2P55039 364 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 VAC14Q08AM6 782 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 PARP6Q2NL67 630 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 WDR74Q6RFH5 385 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 RASGEF1AQ8N9B8 481 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 SLC35B2Q8TB61 432 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 BBC3Q96PG8 261 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 TMEM121Q9BTD3 319 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 SMOXQ9NWM0 555 aa16.48■□□□□ 0.23
CACNA1A-259ENST00000638114 OR2AG2A6NM03 316 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 EIF4E1BA6NMX2 242 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 ARHGAP6O43182 974 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 POP7O75817 140 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 SRP72O76094 671 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 METTL18O95568 372 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 LIPCP11150 499 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 FGF3P11487 239 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 BRAFP15056 766 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 MSH3P20585 1137 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 PBLDP30039 288 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 GDF10P55107 478 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 TMPRSS15P98073 1019 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 PDE1BQ01064 536 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 TGIF1Q15583 401 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 LONRF2Q1L5Z9 754 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 P3H1Q32P28 736 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 DENND5AQ6IQ26 1287 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 TMEM220Q6QAJ8 160 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 ABRAXAS1Q6UWZ7 409 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 DET1Q7L5Y6 550 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 AMZ2Q86W34 360 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 ZFAND4Q86XD8 727 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 FAM129CQ86XR2 697 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 KLHDC8BQ8IXV7 354 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 TAB3Q8N5C8 712 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 CCDC112Q8NEF3 446 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 OR13C4Q8NGS5 318 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 ATG4AQ8WYN0 398 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 CXorf40BQ96DE9 158 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 EPB41L1Q9H4G0 881 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 ASB8Q9H765 288 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 ARNT2Q9HBZ2 717 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 ZNF624Q9P2J8 865 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 KLHL3Q9UH77 587 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 FEZ2Q9UHY8 353 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 SSUH2Q9Y2M2 353 aa16.47■□□□□ 0.23
CACNA1A-259ENST00000638114 OR52A4PA6NMU1 304 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 EFCAB7A8K855 629 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 KCNJ13O60928 360 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 HALP42357 657 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 ZNF140P52738 457 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 MSLNQ13421 630 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 FNBP1LQ5T0N5 605 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 AGAP9Q5VTM2 703 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 KCTD11Q693B1 232 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 WASH2PQ6VEQ5 465 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 CCDC81Q6ZN84 652 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 TMEM26Q6ZUK4 368 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 ART4Q93070 314 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 TAAR9Q96RI9 348 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 CCNL2Q96S94 520 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 LRRC40Q9H9A6 602 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 UCK1Q9HA47 277 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 WASH6PQ9NQA3 447 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 POT1Q9NUX5 634 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 OCIAD1Q9NX40 245 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 PDP2Q9P2J9 529 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 CRLS1Q9UJA2 301 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 MGAQ8IWI9 3026 aa16.46■□□□□ 0.23
CACNA1A-259ENST00000638114 K7ENP7 123 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 TYRP1P17643 537 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 CD82P27701 267 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 HADHAP40939 763 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 XIAPP98170 497 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 SEPT6Q14141 434 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 CLCA4Q14CN2 919 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 INO80CQ6PI98 192 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms