RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CLEC9AQ6UXN8 241 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TMC5Q6UXY8 1006 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 CD300LDQ6UXZ3 194 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 NHLRC1Q6VVB1 395 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 KIAA0408Q6ZU52 694 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TOM1L2Q6ZVM7 507 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 NEK8Q86SG6 692 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 SERINC5Q86VE9 423 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 LDLRAD3Q86YD5 345 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 MFN1Q8IWA4 741 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 MAP7D3Q8IWC1 876 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 KBTBD2Q8IY47 623 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ZZZ3Q8IYH5 903 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 DSELQ8IZU8 1212 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 CLYBLQ8N0X4 340 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 BATF2Q8N1L9 274 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 MINDY1Q8N5J2 469 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 SLC25A41Q8N5S1 370 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 COMMD1Q8N668 190 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ASCC1Q8N9N2 400 aaKnown RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 FNDC5Q8NAU1 212 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 LEMD2Q8NC56 503 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 CCNYQ8ND76 341 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 C17orf47Q8NEP4 570 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TMIEQ8NEW7 156 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 DBF4BQ8NFT6 615 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TTLQ8NG68 377 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 OR7G3Q8NG95 312 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 BBS10Q8TAM1 723 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ZCCHC10Q8TBK6 192 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 GRAPLQ8TC17 118 aaPredicted RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 MITD1Q8WV92 249 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 KBTBD7Q8WVZ9 684 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 RLN3Q8WXF3 142 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 LZICQ8WZA0 190 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 POMGNT1Q8WZA1 660 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 LARP4BQ92615 738 aaKnown RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 PIGKQ92643 395 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 RSC1A1Q92681 617 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 FRAT1Q92837 279 aaPredicted RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 RNF31Q96EP0 1072 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 SAT2Q96F10 170 aaPredicted RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 ZNF479Q96JC4 524 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 LINC00615Q96LM1 132 aaPredicted RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 APOLD1Q96LR9 279 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 C12orf66Q96MD2 445 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PARK7Q99497 189 aaKnown RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 DPYSL5Q9BPU6 564 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 C11orf70Q9BRQ4 267 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ZNF416Q9BWM5 594 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 MRPL1Q9BYD6 325 aaKnown RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 OSBPL8Q9BZF1 889 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 HDHD2Q9H0R4 259 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 RAB17Q9H0T7 212 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PCDHAC1Q9H158 963 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 P2RY12Q9H244 342 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TTYH1Q9H313 450 aaPredicted RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 SMURF2Q9HAU4 748 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TLR8Q9NR97 1041 aaKnown RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 CATSPERZQ9NTU4 200 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PANK4Q9NVE7 773 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 DNAJC17Q9NVM6 304 aaKnown RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 FAM118AQ9NWS6 357 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ZSCAN32Q9NX65 697 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 MPP6Q9NZW5 540 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PEF1Q9UBV8 284 aaKnown RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 SLC25A10Q9UBX3 287 aaPredicted RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 ZNF212Q9UDV6 495 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 DCDC2Q9UHG0 476 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 VPS51Q9UID3 782 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 KCND3Q9UK17 655 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 NUDT5Q9UKK9 219 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 STAP1Q9ULZ2 295 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PLCL2Q9UPR0 1127 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 RNF24Q9Y225 148 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PCDHA13Q9Y5I0 950 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 RNF215Q9Y6U7 377 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ROCK2O75116 1388 aaKnown RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 ANKRD30AQ9BXX3 1397 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 NPC1L1Q9UHC9 1359 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PFASO15067 1338 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 A0A0A6YYC8 382 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 TRBV2A0A0J9YWF9 115 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 GOLGA8QA0A0J9YX86 632 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 MEX3AA1L020 520 aaKnown RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 PRSS38A1L453 326 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 CCDC162PA2VCL2 907 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 FAM90A18PA6NE21 464 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 FAM90A16PA6NEW6 464 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ARHGAP42A6NI28 874 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 FAM90A20PA6NIJ5 464 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SAC3D1A6NKF1 404 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ANXA2P2A6NMY6 339 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 FAM90A9PA6NNJ1 464 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 GABRR3A8MPY1 467 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 C12orf71A8MTZ7 269 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 MEI4A8MW99 385 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 FAM90A5PA8MXJ8 464 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 I3L1I5 382 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 ZNF561-AS1K7EIQ3 104 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms