RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 ICAM3P32942 547 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 MLLT3P42568 568 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 GCNT6Q5T4J0 391 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 PIGXQ8TBF5 258 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 ZBTB45Q96K62 511 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 TMEM121BQ9BXQ6 578 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 POU2F3Q9UKI9 436 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 AKAP3O75969 853 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 ZSCAN5DPP0CG00 497 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 RPS9P46781 194 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 TBX5Q99593 518 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 KIAA1683Q9H0B3 1180 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 GRHL1Q9NZI5 618 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 ALG5Q9Y673 324 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 A0A0A0MRY4 1105 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 CHADO15335 359 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 CCNKO75909 580 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 TTKP33981 857 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 CCR10P46092 362 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 CSTF1Q05048 431 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 SLC10A7Q0GE19 358 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 SPATA13Q96N96 652 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 SLC28A3Q9HAS3 691 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 STBD1O95210 358 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 SLC35G6P0C7Q6 338 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 RFTN2Q52LD8 501 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 AADACL4Q5VUY2 407 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 TMEM17Q86X19 198 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 ZNF221Q9UK13 617 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 ZMYM2Q9UBW7 1377 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 EIF1AYO14602 144 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 NELFEP18615 380 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 PAX7P23759 505 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 TYSND1Q2T9J0 566 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 IQCHQ86VS3 1027 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 CMTR2Q8IYT2 770 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 ACOT12Q8WYK0 555 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 TNS3Q68CZ2 1445 aa17.38■□□□□ 0.37
CACNA1A-225ENST00000636389 SLC31A1O15431 190 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 PGLSO95336 258 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 ANTXR2P58335 489 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 RALGPS2Q86X27 583 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 SHC3Q92529 594 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 LRRC46Q96FV0 321 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 H0YGN5 161 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 M0R129 80 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 KDELR1P24390 212 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 IFI35P80217 286 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 SMAD3P84022 425 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 ST3GAL1Q11201 340 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 ZNF709Q8N972 641 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 LSM14AQ8ND56 463 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 KCTD4Q8WVF5 259 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 MYO19Q96H55 970 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 CCDC28BQ9BUN5 200 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 GMEB2Q9UKD1 530 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 R3HDM2Q9Y2K5 976 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 ADM5C9JUS6 153 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 FSBPO95073 299 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 MSX2P35548 267 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 FAPQ12884 760 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 C1orf94Q6P1W5 598 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 C4orf19Q8IY42 314 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 TBCBQ99426 244 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 EBPLQ9BY08 206 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 GLIS2Q9BZE0 524 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 MED11Q9P086 117 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 ZNF69Q9UC07 566 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 NADKO95544 446 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 IGFBP5P24593 272 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 SLC1A2P43004 574 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 ZNF135P52742 658 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 SMG7Q92540 1137 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 HBS1LQ9Y450 684 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 A8MUA0 341 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 CAPN14A8MX76 684 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 C9J4A7 227 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 BCKDKO14874 412 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 PSKH1P11801 424 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 NR0B1P51843 470 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 CLK4Q9HAZ1 481 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 VNN3Q9NY84 501 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 FZD1Q9UP38 647 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 RIC1Q4ADV7 1423 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 A0A0J9YVX5 310 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 MSCO60682 206 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 UROSP10746 265 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 HOXB8P17481 243 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 YAP1P46937 504 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 DUSP4Q13115 394 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 ALG10BQ5I7T1 473 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 COPS8Q99627 209 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 SEMA6BQ9H3T3 888 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 CFAP97Q9P2B7 532 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 ATP4AP20648 1035 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 RPL6Q02878 288 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 NOXRED1Q6NXP6 359 aa17.37■□□□□ 0.37
CACNA1A-225ENST00000636389 TRAFD1O14545 582 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-225ENST00000636389 PPIBP23284 216 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms