RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 UQCRBP14927 111 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 VCLP18206 1134 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 ERVPABLB-1P60509 514 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 C11orf91Q3C1V1 193 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 IL23RQ5VWK5 629 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 PTRHD1Q6GMV3 140 aaKnown RBP12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 FBXL19Q6PCT2 694 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 CYP2R1Q6VVX0 501 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 GPRIN3Q6ZVF9 776 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 FIBCD1Q8N539 461 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 CDYL2Q8N8U2 506 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 ATP6V1E2Q96A05 226 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 DCUN1D1Q96GG9 259 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 LRGUKQ96M69 825 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 GCNAQ96QF7 691 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 SLC46A2Q9BY10 475 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 CLPBQ9H078 707 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 ASB8Q9H765 288 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 SLC52A3Q9NQ40 469 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 CCL26Q9Y258 94 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 ASB3Q9Y575 518 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 GPR45Q9Y5Y3 372 aa12.3□□□□□ -0.44
UBASH3A-209ENST00000635325 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 NPIPB15A6NHN6 443 aaPredicted RBP12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 GOLGA8CPA6NN73 597 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 FXYD1O00168 92 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 LRG1P02750 347 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 C8AP07357 584 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 UROSP10746 265 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 CCR2P41597 374 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 RPL26P61254 145 aaKnown RBP12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 HTRA4P83105 476 aaPredicted RBP12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 CAPRIN1Q14444 709 aaKnown RBP12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 CHRNA6Q15825 494 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 MPPE1Q53F39 396 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 LETMD1Q6P1Q0 360 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 CERS6Q6ZMG9 384 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 SNX20Q7Z614 316 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 CPXM2Q8N436 756 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 OR56A4Q8NGH8 313 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 FIBINQ8TAL6 211 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 RIN3Q8TB24 985 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 SLC22A17Q8WUG5 538 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 HERVK_113Q902F9 699 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 ROPN1LQ96C74 230 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 CORO1BQ9BR76 489 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 GPATCH1Q9BRR8 931 aaKnown RBP12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 C1orf50Q9BV19 199 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 NUSAP1Q9BXS6 441 aaKnown RBP12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 TRIM8Q9BZR9 551 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 ATP13A3Q9H7F0 1226 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 NOL11Q9H8H0 719 aaKnown RBP12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 ABCB8Q9NUT2 735 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 HCFC1R1Q9NWW0 138 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 MAFFQ9ULX9 164 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 PCDHB1Q9Y5F3 818 aa12.29□□□□□ -0.44
UBASH3A-209ENST00000635325 TRAV19A0A0A6YYK7 116 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 BBIP1A8MTZ0 92 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 NME4O00746 187 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 BNIP3LO60238 219 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 VPS4BO75351 444 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 MATN4O95460 622 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 CYBBP04839 570 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 C8BP07358 591 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 LINC00271P0C7V0 271 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 CTSAP10619 480 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 IDO1P14902 403 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 ZNF7P17097 686 aaPredicted RBP12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 HLA-FP30511 346 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 PPM1AP35813 382 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 ZFP36L2P47974 494 aaKnown RBP12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 CSNK1DP48730 415 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 RPS6KA2Q15349 733 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 SAMD4BQ5PRF9 694 aaKnown RBP12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 RARS2Q5T160 578 aaKnown RBP12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 MPP7Q5T2T1 576 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 OGFOD2Q6N063 350 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 LILRA6Q6PI73 481 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 BLOC1S3Q6QNY0 202 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 FRA10AC1Q70Z53 315 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 RBFAQ8N0V3 343 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 TMEM102Q8N9M5 508 aaPredicted RBP12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 ICA1LQ8NDH6 482 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 OR2AP1Q8NGE2 309 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 VPS33AQ96AX1 596 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 SLCO4A1Q96BD0 722 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 PDLIM5Q96HC4 596 aaKnown RBP12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 LMLNQ96KR4 655 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 ZNF382Q96SR6 550 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 HBEGFQ99075 208 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 VCXQ9H320 206 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 NSUN3Q9H649 340 aaKnown RBP12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 NUDT4Q9NZJ9 180 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 KIAA1522Q9P206 1035 aaPredicted RBP12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 EPS15L1Q9UBC2 864 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 TRBV5-4A0A0C4DH59 114 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 GLYATL1P3A0A0U1RQE8 302 aa12.28□□□□□ -0.44
UBASH3A-209ENST00000635325 KLHL33A6NCF5 533 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms