RNA–Protein interactions for RNA: ENST00000624387.3

ARHGEF9-215, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 3

Gene ARHGEF9, Length 547 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-215	ENST00000624387	DTX3L	Q8TDB6	740 aa		11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	SNRNP27	Q8WVK2	155 aa	Known RBP	11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	ART4	Q93070	314 aa		11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	CXorf40B	Q96DE9	158 aa		11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	WBP1	Q96G27	269 aa		11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	TEFM	Q96QE5	360 aa	Known RBP	11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	C10orf88	Q9H8K7	445 aa		11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	IL26	Q9NPH9	171 aa		11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	FOXJ2	Q9P0K8	574 aa		11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	IL17C	Q9P0M4	197 aa		11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	TMEM9	Q9P0T7	183 aa		11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	KLHL3	Q9UH77	587 aa		11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	SSUH2	Q9Y2M2	353 aa		11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	KALRN	O60229	2985 aa		11.16	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	GRID2IP	A4D2P6	1211 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	C5orf60	A6NFR6	353 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387		B4E171	279 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	BUD23	O43709	281 aa	Known RBP	11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	UBXN7	O94888	489 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	CRTAM	O95727	393 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	AGT	P01019	485 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	PYGM	P11217	842 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	FGF3	P11487	239 aa	Predicted RBP	11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	MSH3	P20585	1137 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	LPO	P22079	712 aa	Predicted RBP	11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	RPL10	P27635	214 aa	Known RBP	11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	PSMB4	P28070	264 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	TSPAN7	P41732	249 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	CFHR1	Q03591	330 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	TAF1A	Q15573	450 aa	Predicted RBP	11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	CHRNA6	Q15825	494 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	LONRF2	Q1L5Z9	754 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	ARHGEF18	Q6ZSZ5	1173 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	AMZ2	Q86W34	360 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	RBM12B	Q8IXT5	1001 aa	Known RBP	11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	IL22RA1	Q8N6P7	574 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	DDHD1	Q8NEL9	900 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	SGF29	Q96ES7	293 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	ZNF514	Q96K75	400 aa	Predicted RBP	11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	FAM118B	Q9BPY3	351 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	ARHGAP9	Q9BRR9	750 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	DDA1	Q9BW61	102 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	TBC1D10A	Q9BXI6	508 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	UCK1	Q9HA47	277 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	POT1	Q9NUX5	634 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	SLC23A2	Q9UGH3	650 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	PCDHGA3	Q9Y5H0	932 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	ARL5A	Q9Y689	179 aa		11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
ARHGEF9-215	ENST00000624387	AHCTF1	Q8WYP5	2266 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	UGT1A9	O60656	530 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	PRAMEF1	O95521	474 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	PRB1	P04280	392 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	RALB	P11234	206 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	UGT1A6	P19224	532 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	UGT1A1	P22309	533 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	UGT1A4	P22310	534 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	UGT1A3	P35503	534 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	HADHA	P40939	763 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	DRG2	P55039	364 aa	Known RBP	11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	UBE2I	P63279	158 aa	Known RBP	11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	KHDC1	Q4VXA5	237 aa	Known RBP	11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	GPRC6A	Q5T6X5	926 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	KIAA1614	Q5VZ46	1190 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	TMEM220	Q6QAJ8	160 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	ABRAXAS1	Q6UWZ7	409 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	CEACAM20	Q6UY09	585 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	WASH2P	Q6VEQ5	465 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	TMEM26	Q6ZUK4	368 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	ZNF547	Q8IVP9	402 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	LRRC57	Q8N9N7	239 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	OR4K2	Q8NGD2	314 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	CCDC110	Q8TBZ0	833 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	ZNF398	Q8TD17	642 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	JPH3	Q8WXH2	748 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	ALG3	Q92685	438 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	DCUN1D1	Q96GG9	259 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	SPATA13	Q96N96	652 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	TBL1Y	Q9BQ87	522 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	APOL2	Q9BQE5	337 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	ZPBP	Q9BS86	351 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	ASB8	Q9H765	288 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	UGT1A7	Q9HAW7	530 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	UGT1A10	Q9HAW8	530 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	UGT1A8	Q9HAW9	530 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	WASH6P	Q9NQA3	447 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	OCIAD1	Q9NX40	245 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	PDP2	Q9P2J9	529 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	CRLS1	Q9UJA2	301 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	B3GALT1	Q9Y5Z6	326 aa		11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	KLHL33	A6NCF5	533 aa		11.13	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	OR2AG2	A6NM03	316 aa		11.13	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	OR52A4P	A6NMU1	304 aa		11.13	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	CFAP99	D6REC4	459 aa		11.13	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	POLR1C	O15160	346 aa	Predicted RBP	11.13	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	EFS	O43281	561 aa		11.13	□□□□□ -0.63
ARHGEF9-215	ENST00000624387	POP7	O75817	140 aa	Known RBP	11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms