RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TRMOQ9BU70 441 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 KCTD5Q9NXV2 234 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 TMCO1Q9UM00 188 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 COQ6Q9Y2Z9 468 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 FADS2P1A8MWK0 482 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 MATN2O00339 956 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 AREL1O15033 823 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 SNX2O60749 519 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 ATP5HO75947 161 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 FSBPO95073 299 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 ATP1B2P14415 290 aaPredicted RBP21.17■□□□□ 0.98
SPAST-204ENST00000621856 POU3F3P20264 500 aaPredicted RBP21.17■□□□□ 0.98
SPAST-204ENST00000621856 MSH3P20585 1137 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 NCALDP61601 193 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 ACSBG2Q5FVE4 666 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 EPGNQ6UW88 154 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 FRA10AC1Q70Z53 315 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 AFAP1L2Q8N4X5 818 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 DTD2Q96FN9 168 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 COQ10AQ96MF6 247 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 CD274Q9NZQ7 290 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 LRRK1Q38SD2 2015 aa21.17■□□□□ 0.98
SPAST-204ENST00000621856 TMEM265A0A087WTH1 108 aa21.16■□□□□ 0.98
SPAST-204ENST00000621856 NCF1BA6NI72 391 aaPredicted RBP21.16■□□□□ 0.98
SPAST-204ENST00000621856 NCF1CA8MVU1 366 aaPredicted RBP21.16■□□□□ 0.98
SPAST-204ENST00000621856 MTX2O75431 263 aa21.16■□□□□ 0.98
SPAST-204ENST00000621856 SIX3O95343 332 aaPredicted RBP21.16■□□□□ 0.98
SPAST-204ENST00000621856 NCF1P14598 390 aaPredicted RBP21.16■□□□□ 0.98
SPAST-204ENST00000621856 TARSP26639 723 aaKnown RBP21.16■□□□□ 0.98
SPAST-204ENST00000621856 TIE1P35590 1138 aa21.16■□□□□ 0.98
SPAST-204ENST00000621856 TUBB3Q13509 450 aa21.16■□□□□ 0.98
SPAST-204ENST00000621856 LRIT3Q3SXY7 679 aa21.16■□□□□ 0.98
SPAST-204ENST00000621856 ADAMTSL2Q86TH1 951 aa21.16■□□□□ 0.98
SPAST-204ENST00000621856 CUZD1Q86UP6 607 aa21.16■□□□□ 0.98
SPAST-204ENST00000621856 HDAC8Q9BY41 377 aa21.16■□□□□ 0.98
SPAST-204ENST00000621856 SAR1AQ9NR31 198 aa21.16■□□□□ 0.98
SPAST-204ENST00000621856 LATS2Q9NRM7 1088 aa21.16■□□□□ 0.98
SPAST-204ENST00000621856 CAPN7Q9Y6W3 813 aa21.16■□□□□ 0.98
SPAST-204ENST00000621856 LRRC14BA6NHZ5 514 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 MYO1CO00159 1063 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 NPC1O15118 1278 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 GRID2O43424 1007 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 LZTS3O60299 673 aaPredicted RBP21.15■□□□□ 0.98
SPAST-204ENST00000621856 RNASEH1O60930 286 aaKnown RBP21.15■□□□□ 0.98
SPAST-204ENST00000621856 DNAJC8O75937 253 aaPredicted RBP21.15■□□□□ 0.98
SPAST-204ENST00000621856 UNC5CO95185 931 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 GM2AP17900 193 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 EEF1DP29692 281 aaKnown RBP21.15■□□□□ 0.98
SPAST-204ENST00000621856 P2RY2P41231 377 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 GALNT1Q10472 559 aaPredicted RBP21.15■□□□□ 0.98
SPAST-204ENST00000621856 ENPP2Q13822 863 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 SLC9B1Q4ZJI4 515 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 DDHD1Q8NEL9 900 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 MAPK15Q8TD08 544 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 BTN2A2Q8WVV5 523 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 NUS1Q96E22 293 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 VPS35Q96QK1 796 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 NUDT4Q9NZJ9 180 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 ARMCX1Q9P291 453 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 FIS1Q9Y3D6 152 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 K7EQS6 105 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 SYNCRIPO60506 623 aaKnown RBP21.15■□□□□ 0.98
SPAST-204ENST00000621856 MMP20O60882 483 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 CBX6O95503 412 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 S100BP04271 92 aaPredicted RBP21.15■□□□□ 0.98
SPAST-204ENST00000621856 SERPINA6P08185 405 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 C6P13671 934 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 TSPAN8P19075 237 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 CNTN1Q12860 1018 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 CRY1Q16526 586 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 TMEM52BQ4KMG9 183 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 LDLRAP1Q5SW96 308 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 TXNDC11Q6PKC3 985 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 CYP2U1Q7Z449 544 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 CACUL1Q86Y37 369 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 RAVER1Q8IY67 606 aaKnown RBP21.15■□□□□ 0.98
SPAST-204ENST00000621856 CXorf40AQ8TE69 158 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 GLYATL1Q969I3 302 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 RAB7BQ96AH8 199 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 FAR2Q96K12 515 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 PPP1R36Q96LQ0 422 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 FAM126AQ9BYI3 521 aaPredicted RBP21.15■□□□□ 0.98
SPAST-204ENST00000621856 NUF2Q9BZD4 464 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 UTP6Q9NYH9 597 aaKnown RBP21.15■□□□□ 0.98
SPAST-204ENST00000621856 KLHL42Q9P2K6 505 aa21.15■□□□□ 0.98
SPAST-204ENST00000621856 GRXCR2A6NFK2 248 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 TMEM233B4DJY2 109 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 SPECC1L-ADORA2AF8WAN1 911 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 STX16-NPEPL1H3BU86 382 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 STX16O14662 325 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 KLK8O60259 260 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 RECQL5O94762 991 aaPredicted RBP21.14■□□□□ 0.97
SPAST-204ENST00000621856 CBSLP0DN79 551 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 CBSP35520 551 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 HK3P52790 923 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 CDH13P55290 713 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 CAMK2GQ13555 558 aaPredicted RBP21.14■□□□□ 0.97
SPAST-204ENST00000621856 PDCD2Q16342 344 aaPredicted RBP21.14■□□□□ 0.97
SPAST-204ENST00000621856 ANKS6Q68DC2 871 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 ASB2Q96Q27 587 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms