RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PROX2Q3B8N5 592 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 CCNJLQ8IV13 435 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 IGDCC3Q8IVU1 814 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 ART4Q93070 314 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 LRRC39Q96DD0 335 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 CCDC97Q96F63 343 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-245ENST00000621399 APOLD1Q96LR9 279 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 TIMM29Q9BSF4 260 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 KLC4Q9NSK0 619 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 SPATS2LQ9NUQ6 558 aaKnown RBP18.31■□□□□ 0.52
CIRBP-245ENST00000621399 SIRPGQ9P1W8 387 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 MARCH4Q9P2E8 410 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-245ENST00000621399 GULP1Q9UBP9 304 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 SLC23A2Q9UGH3 650 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 ZCWPW2A0A1B0GU75 182 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 SPAARA0A1B0GVQ0 90 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 B4DGG1 531 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 GIPC1O14908 333 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 TTC4O95801 387 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 MYF5P13349 255 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 VCLP18206 1134 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 PMLP29590 882 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 NSG1P42857 185 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 RPIAP49247 311 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 DAB2P98082 770 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 SEMA3AQ14563 771 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 LONRF1Q17RB8 773 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 MRNIPQ6NTE8 343 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 NEPROQ6NW34 567 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 CENPUQ71F23 418 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 SDCCAG8Q86SQ7 713 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-245ENST00000621399 LDB1Q86U70 411 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-245ENST00000621399 CLDN19Q8N6F1 224 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 BEND7Q8N7W2 519 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-245ENST00000621399 FAM181AQ8N9Y4 354 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.3■□□□□ 0.52
CIRBP-245ENST00000621399 OSGEPL1Q9H4B0 414 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 L2HGDHQ9H9P8 463 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 EPB41L5Q9HCM4 733 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 C20orf96Q9NUD7 363 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-245ENST00000621399 NCKIPSDQ9NZQ3 722 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 ZC3H7BQ9UGR2 993 aaKnown RBP18.3■□□□□ 0.52
CIRBP-245ENST00000621399 CHMP2BQ9UQN3 213 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 DNAJC16Q9Y2G8 782 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 TEX264Q9Y6I9 313 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 DNMT3AQ9Y6K1 912 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-245ENST00000621399 FAM169AQ9Y6X4 670 aa18.3■□□□□ 0.52
CIRBP-245ENST00000621399 ZNF106Q9H2Y7 1883 aaKnown RBP18.29■□□□□ 0.52
CIRBP-245ENST00000621399 SNX2O60749 519 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 CKMT2P17540 419 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 TTPAP49638 278 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 SIM1P81133 766 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-245ENST00000621399 THOC5Q13769 683 aaKnown RBP18.29■□□□□ 0.52
CIRBP-245ENST00000621399 CRYMQ14894 314 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 NR0B2Q15466 257 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 BCL7AQ4VC05 210 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 SPANXN3Q5MJ09 141 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 ZDHHC24Q6UX98 284 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 PACS1Q6VY07 963 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 C11orf96Q7Z7L8 435 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 AMZ2Q86W34 360 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 ANKMY2Q8IV38 441 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 ARL10Q8N8L6 244 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 FBXO25Q8TCJ0 367 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 ZDHHC1Q8WTX9 485 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 CFAP36Q96G28 342 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 EVA1BQ9NVM1 165 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 IL1RAPL1Q9NZN1 696 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 DMGDHQ9UI17 866 aaKnown RBP18.29■□□□□ 0.52
CIRBP-245ENST00000621399 DCHS1Q96JQ0 3298 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 LRP4O75096 1905 aa18.29■□□□□ 0.52
CIRBP-245ENST00000621399 TDRD6O60522 2096 aaKnown RBP18.29■□□□□ 0.52
CIRBP-245ENST00000621399 E7ESA3 106 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 PFDN6O15212 129 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 SGTAO43765 313 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 OR1I1O60431 355 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 KCNJ13O60928 360 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 NDUFS3O75489 264 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 AP2A2O94973 939 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 CKMT1AP12532 417 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 PBLDP30039 288 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-245ENST00000621399 DUSP3P51452 185 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-245ENST00000621399 CLCNKAP51800 687 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 FOXK2Q01167 660 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 DNAJC3Q13217 504 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 OGFOD3Q6PK18 319 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 GLRX5Q86SX6 157 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 SLC35F3Q8IY50 421 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 ZBED8Q8IZ13 594 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 KYQ8NBH2 561 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 FBXO36Q8NEA4 188 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 GPR150Q8NGU9 434 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 SEC14L1Q92503 715 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 SAYSD1Q9NPB0 183 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 FAM114A2Q9NRY5 505 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 TBC1D29Q9UFV1 150 aa18.28■□□□□ 0.52
CIRBP-245ENST00000621399 MGAT4DA6NG13 374 aa18.27■□□□□ 0.52
CIRBP-245ENST00000621399 EIF3HO15372 352 aaKnown RBP eCLIP18.27■□□□□ 0.52
CIRBP-245ENST00000621399 IDSP22304 550 aa18.27■□□□□ 0.52
CIRBP-245ENST00000621399 PRLHRP49683 370 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms