RNA–Protein interactions for RNA: ENST00000616000.4

STRA6-222, Transcript of stimulated by retinoic acid 6, human

APPRIS P1 TSL 2 BASIC

Gene STRA6, Length 2,843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRA6-222	ENST00000616000	PHYKPL	Q8IUZ5	450 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	PEX5L	Q8IYB4	626 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	TSPAN17	Q96FV3	270 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	RGS18	Q9NS28	235 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	NPAP1	Q9NZP6	1156 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	ZNF229	Q9UJW7	825 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	PDE10A	Q9Y233	779 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	PCDHGA11	Q9Y5H2	935 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	PCDHA9	Q9Y5H5	950 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	NOTO	A8MTQ0	251 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000		H0Y858	1186 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	PRSS56	P0CW18	603 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	BMP4	P12644	408 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	LHX1	P48742	406 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	ARSF	P54793	590 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	DMPK	Q09013	629 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	SLC10A7	Q0GE19	358 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	DNASE1L3	Q13609	305 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	FXN	Q16595	210 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	ZIK1	Q3SY52	487 aa	Predicted RBP	13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	PYCR3	Q53H96	274 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	C6orf141	Q5SZD1	244 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	ZNF549	Q6P9A3	640 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	LGI2	Q8N0V4	545 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	RHOXF1	Q8NHV9	184 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	BPIFB1	Q8TDL5	484 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	PABPC5	Q96DU9	382 aa	Known RBP	13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	L3HYPDH	Q96EM0	354 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	TBATA	Q96M53	351 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	RTP3	Q9BQQ7	232 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	FEM1A	Q9BSK4	669 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	PRKD2	Q9BZL6	878 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	TLR9	Q9NR96	1032 aa		13.11	□□□□□ -0.31
STRA6-222	ENST00000616000	ZNF99	A8MXY4	864 aa	Predicted RBP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	PSMD11	O00231	422 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	TAF4	O00268	1085 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	AZIN1	O14977	448 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	NDUFS2	O75306	463 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	TULP3	O75386	442 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	PTTG1	O95997	202 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	CD1D	P15813	335 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	CCR1	P32246	355 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	GSK3B	P49841	420 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	CHRNE	Q04844	493 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	ZNF33A	Q06730	810 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	CACNB2	Q08289	660 aa	Predicted RBP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	POLD3	Q15054	466 aa	Predicted RBP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	TIGD5	Q53EQ6	642 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	PAGE3	Q5JUK9	113 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	CAPSL	Q8WWF8	208 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	ATL1	Q8WXF7	558 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	SNX18	Q96RF0	628 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	POLG2	Q9UHN1	485 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	DGKB	Q9Y6T7	804 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	EIF3F	O00303	357 aa	Predicted RBP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	SNPH	O15079	494 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	IRAK2	O43187	625 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	PIRT	P0C851	137 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	SHMT2	P34897	504 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	MRPL19	P49406	292 aa	Known RBP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	SLC14A2	Q15849	920 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	SMUG1	Q53HV7	270 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	DSG4	Q86SJ6	1040 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	MED30	Q96HR3	178 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	TP63	Q9H3D4	680 aa	Predicted RBP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	NOL6	Q9H6R4	1146 aa	Known RBP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	CATSPERB	Q9H7T0	1116 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	QPCTL	Q9NXS2	382 aa		13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	CRNN	Q9UBG3	495 aa	Predicted RBP	13.1	□□□□□ -0.31
STRA6-222	ENST00000616000	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.09	□□□□□ -0.31
STRA6-222	ENST00000616000		E9PAM4	449 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	UPK1B	O75841	260 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	WISP3	O95389	354 aa	Predicted RBP	13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	HAPLN1	P10915	354 aa	Predicted RBP	13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	HOXD8	P13378	290 aa	Predicted RBP	13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	ZNF135	P52742	658 aa	Predicted RBP	13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	NFYC	Q13952	458 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	SEMA3A	Q14563	771 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	ADCK1	Q86TW2	530 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	LRRTM3	Q86VH5	581 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	KIAA2013	Q8IYS2	634 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	SVOP	Q8N4V2	548 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	SLC22A17	Q8WUG5	538 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	ZNF566	Q969W8	418 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	ASB2	Q96Q27	587 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	NEK6	Q9HC98	313 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	CDH9	Q9ULB4	789 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	EIF3L	Q9Y262	564 aa	Known RBP	13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	PTCH2	Q9Y6C5	1203 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	BRCA1	P38398	1863 aa	Known RBP	13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	ASPDH	A6ND91	283 aa		13.09	□□□□□ -0.31
STRA6-222	ENST00000616000	EVPLL	A8MZ36	301 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms