RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 GIPC1O14908 333 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 SLC31A1O15431 190 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 RGS16O15492 202 aaPredicted RBP7.94□□□□□ -1.14
PCDH9-205ENST00000614931 NIPSNAP2O75323 286 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 NDUFS3O75489 264 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 RFPL1O75677 317 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 WISP3O95389 354 aaPredicted RBP7.94□□□□□ -1.14
PCDH9-205ENST00000614931 TOP3BO95985 862 aaKnown RBP7.94□□□□□ -1.14
PCDH9-205ENST00000614931 PAK4O96013 591 aaPredicted RBP7.94□□□□□ -1.14
PCDH9-205ENST00000614931 SYPP08247 313 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 SNRPAP09012 282 aaKnown RBP7.94□□□□□ -1.14
PCDH9-205ENST00000614931 MYZAPP0CAP1 466 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 CEACAM1P13688 526 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 GNSP15586 552 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 FDXRP22570 491 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 RPS3P23396 243 aaKnown RBP eCLIP7.94□□□□□ -1.14
PCDH9-205ENST00000614931 PMLP29590 882 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 FMO4P31512 558 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 SPRP35270 261 aaPredicted RBP7.94□□□□□ -1.14
PCDH9-205ENST00000614931 CCNFP41002 786 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 GPR1P46091 355 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 TTPAP49638 278 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 NOVA1P51513 510 aaKnown RBP7.94□□□□□ -1.14
PCDH9-205ENST00000614931 CCR5P51681 352 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 CTSCP53634 463 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 CLDN2P57739 230 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 TAS2R39P59534 338 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 CCDC15Q0P6D6 951 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 ITGA9Q13797 1035 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 ITIH4Q14624 930 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 LRRC14Q15048 493 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 HECTD2Q5U5R9 776 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 KIAA0895LQ68EN5 471 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 PNCKQ6P2M8 343 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 NEK5Q6P3R8 708 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 XKR5Q6UX68 686 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 GCNT7Q6ZNI0 430 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 NLRP8Q86W28 1048 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 HEATR4Q86WZ0 1026 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 RGL4Q8IZJ4 473 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 KRT222Q8N1A0 295 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 C4orf33Q8N1A6 199 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 MINDY1Q8N5J2 469 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 CLDN19Q8N6F1 224 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 GPATCH11Q8N954 259 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 GIMAP7Q8NHV1 300 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 C1orf216Q8TAB5 229 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 BTN2A2Q8WVV5 523 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 ASB12Q8WXK4 309 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.94□□□□□ -1.14
PCDH9-205ENST00000614931 FAM136AQ96C01 138 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 ULK4Q96C45 1275 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 BIRC7Q96CA5 298 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 COX14Q96I36 57 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 ELMO2Q96JJ3 720 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 ATP6V1G3Q96LB4 118 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 TCF12Q99081 682 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 LGR4Q9BXB1 951 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 CDH19Q9H159 772 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 CAAP1Q9H8G2 361 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 FAM53CQ9NYF3 392 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 ZDHHC3Q9NYG2 299 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 IKBKGQ9Y6K9 419 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 DNAH14Q0VDD8 3507 aa7.94□□□□□ -1.14
PCDH9-205ENST00000614931 ARHGEF17Q96PE2 2063 aaPredicted RBP7.94□□□□□ -1.14
PCDH9-205ENST00000614931 IQANK1A0A1B0GTG1 560 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 LRRC72A6NJI9 287 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 GOLGA8RI6L899 631 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 PRMT5O14744 637 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-205ENST00000614931 PHGDHO43175 533 aaKnown RBP7.93□□□□□ -1.14
PCDH9-205ENST00000614931 OPA1O60313 960 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 FSBPO95073 299 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 PKMP14618 531 aaKnown RBP7.93□□□□□ -1.14
PCDH9-205ENST00000614931 ITGB6P18564 788 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 TEAD1P28347 426 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 TRIM23P36406 574 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 ATXN3P54252 364 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-205ENST00000614931 SHC2P98077 582 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 CDK3Q00526 305 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 IRF9Q00978 393 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 PPARDQ03181 441 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 SFSWAPQ12872 951 aaKnown RBP7.93□□□□□ -1.14
PCDH9-205ENST00000614931 DLG1Q12959 904 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 SGCGQ13326 291 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 PDE1CQ14123 709 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-205ENST00000614931 INPP5AQ14642 412 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 ZKSCAN8Q15776 578 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-205ENST00000614931 UAP1L1Q3KQV9 507 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 AARS2Q5JTZ9 985 aaKnown RBP7.93□□□□□ -1.14
PCDH9-205ENST00000614931 TMEM207Q6UWW9 146 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 ADAMTSL4Q6UY14 1074 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 CERS6Q6ZMG9 384 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 TIFABQ6ZNK6 161 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 DET1Q7L5Y6 550 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 ADGRG6Q86SQ4 1221 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 SDCCAG8Q86SQ7 713 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-205ENST00000614931 PIP4P1Q86T03 277 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 EXOC3L1Q86VI1 746 aa7.93□□□□□ -1.14
PCDH9-205ENST00000614931 SRRM1Q8IYB3 904 aaKnown RBP7.93□□□□□ -1.14
PCDH9-205ENST00000614931 RBFAQ8N0V3 343 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms