RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 OR10A6Q8NH74 314 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 WDR36Q8NI36 951 aaKnown RBP10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 SSR3Q9UNL2 185 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 ANKRD36CQ5JPF3 1778 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 MTHFD1P11586 935 aaKnown RBP10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 S100A1P23297 94 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 ASMTP46597 345 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 CDH4P55283 916 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 CYP4F2P78329 520 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 NIPAL4Q0D2K0 466 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 QPRTQ15274 297 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 MED22Q15528 200 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 SETMARQ53H47 684 aaPredicted RBP10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 TNFAIP8L3Q5GJ75 292 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 CPTPQ5TA50 214 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 SULT1C3Q6IMI6 304 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 ATG14Q6ZNE5 492 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 DET1Q7L5Y6 550 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 KRT78Q8N1N4 520 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 CFAP52Q8N1V2 620 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 PARP8Q8N3A8 854 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 BBS4Q96RK4 519 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 GPATCH1Q9BRR8 931 aaKnown RBP10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 ZNF696Q9H7X3 374 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 BRD9Q9H8M2 597 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 MAGEE1Q9HCI5 957 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 TRMT13Q9NUP7 481 aaKnown RBP10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 CYTH4Q9UIA0 394 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 GLYATL1P3A0A0U1RQE8 302 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 PRR23AA6NEV1 266 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 ANKDD1BA6NHY2 528 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 SLC22A1O15245 554 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 CXCR2P25025 360 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 IKBKEQ14164 716 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 FAM92BQ6ZTR7 304 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 ZNF420Q8TAQ5 688 aaPredicted RBP10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 FCGR1BQ92637 280 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 CLP1Q92989 425 aaKnown RBP10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 KAT8Q9H7Z6 458 aaKnown RBP10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 DNAJC11Q9NVH1 559 aa10.81□□□□□ -0.68
CDC42EP3-206ENST00000611976 PIPSLA2A3N6 862 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 FPGTO14772 594 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 PPEF2O14830 753 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 GUCY1B2O75343 617 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 TRBC1P01850 177 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 CLTBP09497 229 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 HSPA7P48741 367 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 PDCD4Q53EL6 469 aaKnown RBP10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 PTCHD4Q6ZW05 846 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 LIX1Q8N485 282 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 OR4A15Q8NGL6 344 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 APOLD1Q96LR9 279 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 SPRTNQ9H040 489 aaPredicted RBP10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 KCNE2Q9Y6J6 123 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 ARL5CA6NH57 179 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 LOC110117498-PIK3R3F6TDL0 507 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 HTRA2O43464 458 aaPredicted RBP10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 NTSP30990 170 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 BNC1Q01954 994 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 GNA13Q14344 377 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 FAM110CQ1W6H9 321 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 NEK10Q6ZWH5 1172 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 DPP10Q8N608 796 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 C2CD4AQ8NCU7 369 aaPredicted RBP10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 TEFMQ96QE5 360 aaKnown RBP10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 RASSF1Q9NS23 344 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 TBCCD1Q9NVR7 557 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 CNOT11Q9UKZ1 510 aaKnown RBP10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 DOLKQ9UPQ8 538 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 PDLIM1O00151 329 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 MTPNP58546 118 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 PFKPQ01813 784 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 MTSS1LQ765P7 747 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 SIDT2Q8NBJ9 832 aaKnown RBP10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 TAMM41Q96BW9 452 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 CLEC4MQ9H2X3 399 aaPredicted RBP10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 TLR6Q9Y2C9 796 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 GMEB1Q9Y692 573 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 TMCC2O75069 709 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 ALDH1A2O94788 518 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 KCNE1P15382 129 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 MAPK9P45984 424 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 GSK3BP49841 420 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 CCR3P51677 355 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 CDH15P55291 814 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 FAM182AQ5T1J6 154 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 MOB2Q70IA6 237 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 PIK3C3Q8NEB9 887 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 SLC38A2Q96QD8 506 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 DNAAF2Q9NVR5 837 aaKnown RBP10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 LRP5O75197 1615 aa10.8□□□□□ -0.68
CDC42EP3-206ENST00000611976 MYO5AQ9Y4I1 1855 aaKnown RBP10.79□□□□□ -0.68
CDC42EP3-206ENST00000611976 IRGMA1A4Y4 181 aa10.79□□□□□ -0.68
CDC42EP3-206ENST00000611976 EDIL3O43854 480 aa10.79□□□□□ -0.68
CDC42EP3-206ENST00000611976 PENKP01210 267 aaPredicted RBP10.79□□□□□ -0.68
CDC42EP3-206ENST00000611976 CTSKP43235 329 aa10.79□□□□□ -0.68
CDC42EP3-206ENST00000611976 CXCR3P49682 368 aa10.79□□□□□ -0.68
CDC42EP3-206ENST00000611976 FBXO48Q5FWF7 155 aa10.79□□□□□ -0.68
CDC42EP3-206ENST00000611976 ANKRD23Q86SG2 305 aa10.79□□□□□ -0.68
CDC42EP3-206ENST00000611976 ZDHHC21Q8IVQ6 265 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms