RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 PHF24Q9UPV7 400 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 ASPDHA6ND91 283 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 E2F3O00716 465 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 AOC2O75106 756 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 SEC24AO95486 1093 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 TUFMP49411 452 aaKnown RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 CLCN4P51793 760 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 TIGD2Q4W5G0 525 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 ATP6AP1LQ52LC2 224 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 PDCD4Q53EL6 469 aaKnown RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 HABP4Q5JVS0 413 aaKnown RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 ADGRF1Q5T601 910 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 FRA10AC1Q70Z53 315 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 CHST9Q7L1S5 443 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 CMTR2Q8IYT2 770 aaKnown RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 TMEM199Q8N511 208 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 SEPT8Q92599 483 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 CENPNQ96H22 339 aaPredicted RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 CDK15Q96Q40 435 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 MRPL9Q9BYD2 267 aaKnown RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 BRINP2Q9C0B6 783 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 CWH43Q9H720 699 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 CLK4Q9HAZ1 481 aaKnown RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 TSR3Q9UJK0 312 aaKnown RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 ASB1Q9Y576 335 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 COMMD10Q9Y6G5 202 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 IQCF5A8MTL0 148 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 SNAP91O60641 907 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 TMCC1O94876 653 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 NCK1P16333 377 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 CD9P21926 228 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 PTGER3P43115 390 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 MRPL19P49406 292 aaKnown RBP17.03■□□□□ 0.32
NEK3-206ENST00000611833 TGFBIQ15582 683 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 C6orf136Q5SQH8 315 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 MFSD2AQ8NA29 543 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 TRPV3Q8NET8 790 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 OR52B6Q8NGF0 335 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 GRIN3AQ8TCU5 1115 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 OVCA2Q8WZ82 227 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 DDX18Q9NVP1 670 aaKnown RBP17.03■□□□□ 0.32
NEK3-206ENST00000611833 PKP3Q9Y446 797 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 C2orf78A6NCI8 922 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 GPR39O43194 453 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 ESR1P03372 595 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 INHAP05111 366 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 FCGR1AP12314 374 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 ZFP36L2P47974 494 aaKnown RBP17.03■□□□□ 0.32
NEK3-206ENST00000611833 BFSP2Q13515 415 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 AASDHQ4L235 1098 aaPredicted RBP17.03■□□□□ 0.32
NEK3-206ENST00000611833 EPHX4Q8IUS5 362 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 FAM126BQ8IXS8 530 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 TTC30BQ8N4P2 665 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 TMEM74Q96NL1 305 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 ZNF382Q96SR6 550 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 VN1R3Q9BXE9 311 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 ZIM2Q9NZV7 527 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 SLAMF8Q9P0V8 285 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 SLC8A2Q9UPR5 921 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 CEPT1Q9Y6K0 416 aa17.03■□□□□ 0.32
NEK3-206ENST00000611833 FAM234BA2RU67 622 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 C1RP00736 705 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 ASLP04424 464 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 FIBCD1Q8N539 461 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 METTL6Q8TCB7 284 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 HM13Q8TCT9 377 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 CEP295NLQ96MC4 621 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 PLEKHG4BQ96PX9 1271 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 GPR63Q9BZJ6 419 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 SMOXQ9NWM0 555 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 NUDT4Q9NZJ9 180 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 TRPM5Q9NZQ8 1165 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 OAZ3Q9UMX2 235 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 SLC30A1Q9Y6M5 507 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 TANC1Q9C0D5 1861 aa17.02■□□□□ 0.32
NEK3-206ENST00000611833 ANKRD12Q6UB98 2062 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 SCAMP3O14828 347 aaKnown RBP17.02■□□□□ 0.31
NEK3-206ENST00000611833 CLGNO14967 610 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 HOXA2O43364 376 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 EFEMP2O95967 443 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 CDH2P19022 906 aaPredicted RBP17.02■□□□□ 0.31
NEK3-206ENST00000611833 CCT8P50990 548 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 EEFSECP57772 596 aaKnown RBP17.02■□□□□ 0.31
NEK3-206ENST00000611833 ERVPABLB-1P60509 514 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 MERTKQ12866 999 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 TAF12Q16514 161 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 TMEM259Q4ZIN3 620 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 NANOGP8Q6NSW7 305 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 TTC33Q6PID6 262 aaPredicted RBP17.02■□□□□ 0.31
NEK3-206ENST00000611833 NCEH1Q6PIU2 408 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 IL27RAQ6UWB1 636 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 PTRH1Q86Y79 214 aaKnown RBP17.02■□□□□ 0.31
NEK3-206ENST00000611833 KIAA2013Q8IYS2 634 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 STK40Q8N2I9 435 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 DTNBP1Q96EV8 351 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 ADI1Q9BV57 179 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 PIF1Q9H611 641 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 NANOGQ9H9S0 305 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 ANAPC2Q9UJX6 822 aa17.02■□□□□ 0.31
NEK3-206ENST00000611833 PCDHB9Q9Y5E1 797 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms