RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 PNPLA1Q8N8W4 532 aa22.7■■□□□ 1.22
SNX5-217ENST00000606557 BBOF1Q8ND07 529 aa22.7■■□□□ 1.22
SNX5-217ENST00000606557 MNS1Q8NEH6 495 aa22.7■■□□□ 1.22
SNX5-217ENST00000606557 ZDHHC1Q8WTX9 485 aa22.7■■□□□ 1.22
SNX5-217ENST00000606557 FCRL3Q96P31 734 aaPredicted RBP22.7■■□□□ 1.22
SNX5-217ENST00000606557 EVA1BQ9NVM1 165 aa22.7■■□□□ 1.22
SNX5-217ENST00000606557 WHRNQ9P202 907 aa22.7■■□□□ 1.22
SNX5-217ENST00000606557 MARCH4Q9P2E8 410 aaPredicted RBP22.7■■□□□ 1.22
SNX5-217ENST00000606557 GULP1Q9UBP9 304 aa22.7■■□□□ 1.22
SNX5-217ENST00000606557 APOBEC2Q9Y235 224 aaKnown RBP22.7■■□□□ 1.22
SNX5-217ENST00000606557 MAD1L1Q9Y6D9 718 aa22.7■■□□□ 1.22
SNX5-217ENST00000606557 VAPBO95292 243 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 ATP1B2P14415 290 aaPredicted RBP22.69■■□□□ 1.22
SNX5-217ENST00000606557 PRLHRP49683 370 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 ANKRD20A4Q4UJ75 823 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 LYPLAL1Q5VWZ2 237 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 C8orf74Q6P047 294 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 GUSBP11Q6P575 273 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 PACS1Q6VY07 963 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 CERS6Q6ZMG9 384 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 C17orf82Q86X59 251 aaPredicted RBP22.69■■□□□ 1.22
SNX5-217ENST00000606557 NAGSQ8N159 534 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 PDIK1LQ8N165 341 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 BEND7Q8N7W2 519 aaPredicted RBP22.69■■□□□ 1.22
SNX5-217ENST00000606557 ZNF669Q96BR6 464 aaPredicted RBP22.69■■□□□ 1.22
SNX5-217ENST00000606557 STAMBPL1Q96FJ0 436 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 PWWP2AQ96N64 755 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 RAB17Q9H0T7 212 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 GRHL1Q9NZI5 618 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 TBC1D29Q9UFV1 150 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 PADI4Q9UM07 663 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 UTP11Q9Y3A2 253 aaKnown RBP22.69■■□□□ 1.22
SNX5-217ENST00000606557 PCDHGA1Q9Y5H4 931 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 DNMT3AQ9Y6K1 912 aaPredicted RBP22.69■■□□□ 1.22
SNX5-217ENST00000606557 RPS6KL1Q9Y6S9 549 aa22.69■■□□□ 1.22
SNX5-217ENST00000606557 COL27A1Q8IZC6 1860 aaPredicted RBP22.68■■□□□ 1.22
SNX5-217ENST00000606557 ZCWPW2A0A1B0GU75 182 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 CTAGE15A4D2H0 777 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 EME2A4GXA9 379 aaPredicted RBP22.68■■□□□ 1.22
SNX5-217ENST00000606557 A6NCN8 305 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 CD3EAPO15446 510 aaKnown RBP22.68■■□□□ 1.22
SNX5-217ENST00000606557 RFPL3O75679 317 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 USP1O94782 785 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 EML2O95834 649 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 CTAGE8P0CG41 777 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 PAMP19021 973 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 NSG1P42857 185 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 ARCN1P48444 511 aaKnown RBP22.68■■□□□ 1.22
SNX5-217ENST00000606557 DMPKQ09013 629 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 ILKQ13418 452 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 HLTFQ14527 1009 aaKnown RBP eCLIP22.68■■□□□ 1.22
SNX5-217ENST00000606557 HIF1AQ16665 826 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 BBS9Q3SYG4 887 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 C14orf28Q4W4Y0 310 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 AARS2Q5JTZ9 985 aaKnown RBP22.68■■□□□ 1.22
SNX5-217ENST00000606557 CTAGE6Q86UF2 777 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 AMZ2Q86W34 360 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 CTAGE4Q8IX94 777 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 MMGT1Q8N4V1 131 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 PATE1Q8WXA2 126 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 LRRC1Q9BTT6 524 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 OSGEPL1Q9H4B0 414 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 DNAJC16Q9Y2G8 782 aa22.68■■□□□ 1.22
SNX5-217ENST00000606557 KCNJ13O60928 360 aa22.67■■□□□ 1.22
SNX5-217ENST00000606557 POP7O75817 140 aaKnown RBP22.67■■□□□ 1.22
SNX5-217ENST00000606557 VCLP18206 1134 aa22.67■■□□□ 1.22
SNX5-217ENST00000606557 PGAM1P18669 254 aa22.67■■□□□ 1.22
SNX5-217ENST00000606557 CALCOCO2Q13137 446 aa22.67■■□□□ 1.22
SNX5-217ENST00000606557 CCDC157Q569K6 752 aa22.67■■□□□ 1.22
SNX5-217ENST00000606557 ERMP1Q7Z2K6 904 aa22.67■■□□□ 1.22
SNX5-217ENST00000606557 CLDN19Q8N6F1 224 aa22.67■■□□□ 1.22
SNX5-217ENST00000606557 NOA1Q8NC60 698 aaKnown RBP22.67■■□□□ 1.22
SNX5-217ENST00000606557 IFI44Q8TCB0 444 aa22.67■■□□□ 1.22
SNX5-217ENST00000606557 LINC00615Q96LM1 132 aaPredicted RBP22.67■■□□□ 1.22
SNX5-217ENST00000606557 TTC1Q99614 292 aa22.67■■□□□ 1.22
SNX5-217ENST00000606557 EBNA1BP2Q99848 306 aaKnown RBP22.67■■□□□ 1.22
SNX5-217ENST00000606557 CPED1A4D0V7 1026 aa22.66■■□□□ 1.22
SNX5-217ENST00000606557 GOLGA8KD6RF30 607 aa22.66■■□□□ 1.22
SNX5-217ENST00000606557 GOLGA8TH3BQL2 631 aa22.66■■□□□ 1.22
SNX5-217ENST00000606557 AP2A2O94973 939 aa22.66■■□□□ 1.22
SNX5-217ENST00000606557 GP1BAP07359 652 aa22.66■■□□□ 1.22
SNX5-217ENST00000606557 F3P13726 295 aa22.66■■□□□ 1.22
SNX5-217ENST00000606557 PBLDP30039 288 aaPredicted RBP22.66■■□□□ 1.22
SNX5-217ENST00000606557 MAZP56270 477 aaKnown RBP22.66■■□□□ 1.22
SNX5-217ENST00000606557 ARL4CP56559 192 aa22.66■■□□□ 1.22
SNX5-217ENST00000606557 SMAD1Q15797 465 aaKnown RBP22.66■■□□□ 1.22
SNX5-217ENST00000606557 PERM1Q5SV97 790 aa22.66■■□□□ 1.22
SNX5-217ENST00000606557 EFL1Q7Z2Z2 1120 aaKnown RBP22.66■■□□□ 1.22
SNX5-217ENST00000606557 LDB1Q86U70 411 aaPredicted RBP22.66■■□□□ 1.22
SNX5-217ENST00000606557 IGDCC3Q8IVU1 814 aa22.66■■□□□ 1.22
SNX5-217ENST00000606557 NAT6Q93015 286 aa22.66■■□□□ 1.22
SNX5-217ENST00000606557 WDR83Q9BRX9 315 aaKnown RBP22.66■■□□□ 1.22
SNX5-217ENST00000606557 PRDM8Q9NQV8 689 aa22.66■■□□□ 1.22
SNX5-217ENST00000606557 PRSS21Q9Y6M0 314 aa22.66■■□□□ 1.22
SNX5-217ENST00000606557 KLHL33A6NCF5 533 aa22.65■■□□□ 1.22
SNX5-217ENST00000606557 OR1I1O60431 355 aa22.65■■□□□ 1.22
SNX5-217ENST00000606557 SNX2O60749 519 aa22.65■■□□□ 1.22
SNX5-217ENST00000606557 POLBP06746 335 aa22.65■■□□□ 1.22
SNX5-217ENST00000606557 PPARGP37231 505 aaPredicted RBP22.65■■□□□ 1.22
SNX5-217ENST00000606557 TTPAP49638 278 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms