RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 CCDC38Q502W7 563 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 PHF19Q5T6S3 580 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 TMEM220Q6QAJ8 160 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 ABRAXAS1Q6UWZ7 409 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 DET1Q7L5Y6 550 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 PIM3Q86V86 326 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 ZFAND4Q86XD8 727 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 SPDYE1Q8NFV5 336 aaPredicted RBP10.49□□□□□ -0.73
TUBE1-210ENST00000604967 OR4D9Q8NGE8 314 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 ZNF398Q8TD17 642 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 RNF31Q96EP0 1072 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 ZNF778Q96MU6 729 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 TMEM74Q96NL1 305 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 TIMM29Q9BSF4 260 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 ANP32EQ9BTT0 268 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 OSGEPL1Q9H4B0 414 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 ETNK1Q9HBU6 452 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 SARS2Q9NP81 518 aaKnown RBP10.49□□□□□ -0.73
TUBE1-210ENST00000604967 RAD18Q9NS91 495 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 OCIAD1Q9NX40 245 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 SMARCAL1Q9NZC9 954 aa10.49□□□□□ -0.73
TUBE1-210ENST00000604967 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.49□□□□□ -0.73
TUBE1-210ENST00000604967 ATRXP46100 2492 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 TRBV5-4A0A0C4DH59 114 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 MROH6A6NGR9 719 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 GPR89AB7ZAQ6 455 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 GPR89BP0CG08 455 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 XRCC1P18887 633 aaPredicted RBP10.48□□□□□ -0.73
TUBE1-210ENST00000604967 CXCR5P32302 372 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 RPL22P35268 128 aaKnown RBP10.48□□□□□ -0.73
TUBE1-210ENST00000604967 KCNJ1P48048 391 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 POU6F1Q14863 301 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 INSCQ1MX18 579 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 DUS1LQ6P1R4 473 aaKnown RBP10.48□□□□□ -0.73
TUBE1-210ENST00000604967 ARHGEF18Q6ZSZ5 1173 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 ARHGAP22Q7Z5H3 698 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 TRAPPC5Q8IUR0 188 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 REXO1L1PQ8IX06 675 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 LSMEM2Q8N112 164 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 ZNF248Q8NDW4 579 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 OR52K1Q8NGK4 314 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 RSC1A1Q92681 617 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 USP7Q93009 1102 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 SRPK1Q96SB4 655 aaKnown RBP10.48□□□□□ -0.73
TUBE1-210ENST00000604967 SLC38A3Q99624 504 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 TSGA10Q9BZW7 698 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 SLC40A1Q9NP59 571 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 THSD1Q9NS62 852 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 SLC2A6Q9UGQ3 507 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 PSMD13Q9UNM6 376 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 PPP2R2CQ9Y2T4 447 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 AAR2Q9Y312 384 aaKnown RBP10.48□□□□□ -0.73
TUBE1-210ENST00000604967 PCDHGA7Q9Y5G6 932 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 PRSS21Q9Y6M0 314 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 SDK2Q58EX2 2172 aa10.48□□□□□ -0.73
TUBE1-210ENST00000604967 IGLV3-16A0A075B6K0 115 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 KIR2DS5A0A0G2JLQ3 304 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 A0A0G2JNG1 304 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 A8MU76 341 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 KIR2DS3K7RE56 304 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 KLK10O43240 276 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 KRT86O43790 486 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 KIF1CO43896 1103 aaKnown RBP10.47□□□□□ -0.73
TUBE1-210ENST00000604967 CCDC175P0C221 793 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 TYRP1P17643 537 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 RBMS1P29558 406 aaKnown RBP10.47□□□□□ -0.73
TUBE1-210ENST00000604967 LEPRP48357 1165 aaKnown RBP10.47□□□□□ -0.73
TUBE1-210ENST00000604967 MAPK10P53779 464 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 DMPKQ09013 629 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 GPR18Q14330 331 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 KIR2DS5Q14953 304 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 RPS6KA1Q15418 735 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 P3H1Q32P28 736 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 LDLRAP1Q5SW96 308 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 FNBP1LQ5T0N5 605 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 AGAP9Q5VTM2 703 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 TMEM71Q6P5X7 295 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 WASH2PQ6VEQ5 465 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 TMEM26Q6ZUK4 368 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 DTX1Q86Y01 620 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 SPNS2Q8IVW8 549 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 NXPE1Q8N323 547 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 PRELID2Q8N945 189 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 TTC13Q8NBP0 860 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 CCDC112Q8NEF3 446 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 OR13J1Q8NGT2 312 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 GDAP1Q8TB36 358 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 KCNE4Q8WWG9 221 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 MS4A14Q96JA4 679 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 RMDN2Q96LZ7 410 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 SPRY4Q9C004 299 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 ASB8Q9H765 288 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 APMAPQ9HDC9 416 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 WASH6PQ9NQA3 447 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 NLE1Q9NVX2 485 aaPredicted RBP10.47□□□□□ -0.73
TUBE1-210ENST00000604967 ACSL6Q9UKU0 697 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 PKP3Q9Y446 797 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 CFAP20Q9Y6A4 193 aaKnown RBP10.47□□□□□ -0.73
TUBE1-210ENST00000604967 BSNQ9UPA5 3926 aa10.47□□□□□ -0.73
TUBE1-210ENST00000604967 TCRBV7S3A2A0A539 114 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms