RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 EDEM2Q9BV94 578 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 ZCCHC2Q9C0B9 1178 aaKnown RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 NSRP1Q9H0G5 558 aaKnown RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 ERVMER34-1Q9H9K5 563 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 BPIFA1Q9NP55 256 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 IARS2Q9NSE4 1012 aaKnown RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 NLE1Q9NVX2 485 aaPredicted RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 SLC17A6Q9P2U8 582 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 KLQ9UEF7 1012 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 PSAT1Q9Y617 370 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 SLC30A1Q9Y6M5 507 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 PIKFYVEQ9Y2I7 2098 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 PTPRZ1P23471 2315 aaPredicted RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 SPTY2D1-AS1A0A0U1RR47 76 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 LNP1A1A4G5 178 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 GOLGA8RI6L899 631 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 NDUFAB1O14561 156 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 LDB2O43679 373 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 BUD23O43709 281 aaKnown RBP9.97□□□□□ -0.81
UPF1-213ENST00000601981 PRAMEF1O95521 474 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 WNT1P04628 370 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 DRD4P21917 467 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 ARNTP27540 789 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 PPARGP37231 505 aaPredicted RBP9.97□□□□□ -0.81
UPF1-213ENST00000601981 SERPINB8P50452 374 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 CCT8P50990 548 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 SEC24CP53992 1094 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 HNRNPKP61978 463 aaKnown RBP eCLIP9.97□□□□□ -0.81
UPF1-213ENST00000601981 PRAMEP78395 509 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 TMPRSS15P98073 1019 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 CDK3Q00526 305 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 PPARDQ03181 441 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 ACVR1Q04771 509 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 DMTNQ08495 405 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 THOC5Q13769 683 aaKnown RBP9.97□□□□□ -0.81
UPF1-213ENST00000601981 GTF2H3Q13889 308 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 SUZ12Q15022 739 aaKnown RBP9.97□□□□□ -0.81
UPF1-213ENST00000601981 SF3A2Q15428 464 aaKnown RBP9.97□□□□□ -0.81
UPF1-213ENST00000601981 SEPT7Q16181 437 aaKnown RBP9.97□□□□□ -0.81
UPF1-213ENST00000601981 INAVAQ3KP66 663 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 LDLRAP1Q5SW96 308 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 HHATQ5VTY9 493 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 TCEAL6Q6IPX3 200 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 AFTPHQ6ULP2 937 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 ENPP7Q6UWV6 458 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 LAYNQ6UX15 382 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 FAM151BQ6UXP7 276 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 RGS9BPQ6ZS82 235 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 KIAA0408Q6ZU52 694 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 STRA8Q7Z7C7 330 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 GALNT7Q86SF2 657 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 TAX1BP1Q86VP1 789 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 LMNTD2Q8IXW0 634 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 DCLK2Q8N568 766 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 MINDY1Q8N5J2 469 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 PLA2G15Q8NCC3 412 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 GPR26Q8NDV2 337 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 OR56A4Q8NGH8 313 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 OR13C4Q8NGS5 318 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 GDAP1Q8TB36 358 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 CALML6Q8TD86 181 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 TCP10LQ8TDR4 215 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 ZNF473Q8WTR7 871 aaKnown RBP9.97□□□□□ -0.81
UPF1-213ENST00000601981 TCEAL3Q969E4 200 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 EID2BQ96D98 161 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 VPS35Q96QK1 796 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 AGAP2Q99490 1192 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 ELF4Q99607 663 aaPredicted RBP9.97□□□□□ -0.81
UPF1-213ENST00000601981 TEX101Q9BY14 249 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 SLC13A1Q9BZW2 595 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 IQCGQ9H095 443 aaKnown RBP9.97□□□□□ -0.81
UPF1-213ENST00000601981 RHOJQ9H4E5 214 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 SMOC1Q9H4F8 434 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 GAREM1Q9H706 876 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 TMEM9BQ9NQ34 198 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 GPR27Q9NS67 375 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 DNAJC28Q9NX36 388 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 IL1RAPL1Q9NZN1 696 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 CRLS1Q9UJA2 301 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 OR1A2Q9Y585 309 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 SNX11Q9Y5W9 270 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 SLCO1B1Q9Y6L6 691 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 ZNF292O60281 2723 aa9.97□□□□□ -0.81
UPF1-213ENST00000601981 GPR89AB7ZAQ6 455 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 CFAP99D6REC4 459 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 F8W8V4 182 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 H7C0S8 307 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 K7ESM1 405 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 TPP1O14773 563 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 TNFRSF10CO14798 259 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 PFDN6O15212 129 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 INPP4BO15327 924 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 SRP72O76094 671 aaKnown RBP9.96□□□□□ -0.82
UPF1-213ENST00000601981 SLC25A14O95258 325 aaPredicted RBP9.96□□□□□ -0.82
UPF1-213ENST00000601981 RASGRP1O95267 797 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 VAPBO95292 243 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 TNFP01375 233 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 ALDOAP04075 364 aaKnown RBP9.96□□□□□ -0.82
UPF1-213ENST00000601981 GPR89BP0CG08 455 aa9.96□□□□□ -0.82
UPF1-213ENST00000601981 DHRS4L1P0CG22 281 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms