RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	SLC35F6	Q8N357	371 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	DNAAF3	Q8N9W5	541 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	SNIP1	Q8TAD8	396 aa	Known RBP	13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	STYX	Q8WUJ0	223 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	HEXDC	Q8WVB3	486 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	ULK4	Q96C45	1275 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	SGF29	Q96ES7	293 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	DNAJC1	Q96KC8	554 aa	Known RBP	13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	SLC38A3	Q99624	504 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	DPYSL5	Q9BPU6	564 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	SEMA6C	Q9H3T2	930 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	OSGEPL1	Q9H4B0	414 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	FAM96A	Q9H5X1	160 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	STN1	Q9H668	368 aa	Known RBP	13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	RDH14	Q9HBH5	336 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	EPB41L5	Q9HCM4	733 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	ASCL3	Q9NQ33	180 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	CASS4	Q9NQ75	786 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	CPNE7	Q9UBL6	633 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	SLC30A1	Q9Y6M5	507 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	MYLK	Q15746	1914 aa		13.25	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	SCN8A	Q9UQD0	1980 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	TRBV5-4	A0A0C4DH59	114 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	PMS2P1	A4D2B8	440 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	KLHL33	A6NCF5	533 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	OR2AG2	A6NM03	316 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	CCL22	O00626	93 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	PLD2	O14939	933 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	GAS8	O95995	478 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	APRT	P07741	180 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	BRAF	P15056	766 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	ITGAL	P20701	1170 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	ADRA1D	P25100	572 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	RBMS1	P29558	406 aa	Known RBP	13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	AKT1	P31749	480 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	MC4R	P32245	332 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	EIF2S3	P41091	472 aa	Known RBP	13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	SLC19A1	P41440	591 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	GPLD1	P80108	840 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	CFHR1	Q03591	330 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	LAMB3	Q13751	1172 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	SEPT6	Q14141	434 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	SKIDA1	Q1XH10	827 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	FNBP1L	Q5T0N5	605 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	NKAIN2	Q5VXU1	208 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	PPP1R21	Q6ZMI0	780 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	RAB11FIP2	Q7L804	512 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	FBXO39	Q8N4B4	442 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	TMEM159	Q96B96	161 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	RANBP9	Q96S59	729 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	COPS8	Q99627	209 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	NUDT22	Q9BRQ3	303 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	UCK1	Q9HA47	277 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	EIF2B3	Q9NR50	452 aa	Known RBP	13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	TRMT1	Q9NXH9	659 aa	Known RBP	13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	CRLS1	Q9UJA2	301 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	RIMKLB	Q9ULI2	386 aa		13.24	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	URB1	O60287	2271 aa	Known RBP	13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	IGLV3-16	A0A075B6K0	115 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	IGHV5-10-1	A0A0J9YXX1	117 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	HEATR9	A2RTY3	570 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	MGAT4D	A6NG13	374 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	PDZK1P1	A8MUH7	402 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	SGTA	O43765	313 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	KIF5C	O60282	957 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	VIP	P01282	170 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	RALB	P11234	206 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	HOXB3	P14651	431 aa	Predicted RBP	13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	MSN	P26038	577 aa	Known RBP	13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	RPL10	P27635	214 aa	Known RBP	13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	CDKN1C	P49918	316 aa	Predicted RBP	13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	LIMK2	P53671	638 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	EPHA4	P54764	986 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	DRG2	P55039	364 aa	Known RBP	13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	MAP9	Q49MG5	647 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	BCL7A	Q4VC05	210 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	CCDC38	Q502W7	563 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	METRNL	Q641Q3	311 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	TMEM71	Q6P5X7	295 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	DET1	Q7L5Y6	550 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	ZNF761	Q86XN6	746 aa	Predicted RBP	13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	OR4D9	Q8NGE8	314 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	OR10G6	Q8NH81	332 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	DCUN1D1	Q96GG9	259 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	MS4A14	Q96JA4	679 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	LINC00615	Q96LM1	132 aa	Predicted RBP	13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	OSBPL9	Q96SU4	736 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	NAP1L3	Q99457	506 aa	Predicted RBP	13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	THSD1	Q9NS62	852 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	ZDHHC3	Q9NYG2	299 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	PDP2	Q9P2J9	529 aa		13.23	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	LILRA5	A6NI73	299 aa		13.22	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	CDRT15L2	A8MXV6	281 aa		13.22	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	CFAP99	D6REC4	459 aa		13.22	□□□□□ -0.29
ARHGEF1-222	ENST00000600517	AP3B1	O00203	1094 aa		13.22	□□□□□ -0.29

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