RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 GLYATL1P3A0A0U1RQE8 302 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 MACROD2A1Z1Q3 448 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 OR52A4PA6NMU1 304 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 H7C0C1 242 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 TOX3O15405 576 aaPredicted RBP9.63□□□□□ -0.87
VRK3-216ENST00000599342 KCNJ13O60928 360 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 IPO7O95373 1038 aaKnown RBP9.63□□□□□ -0.87
VRK3-216ENST00000599342 C9P02748 559 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 CTNNA2P26232 953 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 AKT1P31749 480 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 CAPZBP47756 277 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 ATP5OP48047 213 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 SEPHS1P49903 392 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 GEMP55040 296 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 ADCY2Q08462 1091 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 ABHD18Q0P651 414 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 CHRNA6Q15825 494 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 LDLRAP1Q5SW96 308 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 AGAP9Q5VTM2 703 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 ITPRIPL1Q6GPH6 555 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 C11orf63Q6NUN7 778 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 CYB5D1Q6P9G0 228 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 ABRAXAS1Q6UWZ7 409 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 WASH2PQ6VEQ5 465 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 DAAM2Q86T65 1068 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 AMZ2Q86W34 360 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 CCDC170Q8IYT3 715 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 TTC30BQ8N4P2 665 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 ESX1Q8N693 406 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 TC2NQ8N9U0 490 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 DDHD1Q8NEL9 900 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 DTX3LQ8TDB6 740 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 ZDHHC12Q96GR4 267 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 OXNAD1Q96HP4 312 aaPredicted RBP9.63□□□□□ -0.87
VRK3-216ENST00000599342 SLC45A3Q96JT2 553 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 MRGPRX2Q96LB1 330 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 ULBP3Q9BZM4 244 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 SLC25A18Q9H1K4 315 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 GBA3Q9H227 469 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 ADNPQ9H2P0 1102 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 ZNF768Q9H5H4 540 aaKnown RBP9.63□□□□□ -0.87
VRK3-216ENST00000599342 CLMPQ9H6B4 373 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 IL26Q9NPH9 171 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 WASH6PQ9NQA3 447 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 GEMIN8Q9NWZ8 242 aaKnown RBP9.63□□□□□ -0.87
VRK3-216ENST00000599342 OGFRQ9NZT2 677 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 IL17CQ9P0M4 197 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 TRHDEQ9UKU6 1024 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 TMEM184BQ9Y519 407 aaPredicted RBP9.63□□□□□ -0.87
VRK3-216ENST00000599342 PCDHA13Q9Y5I0 950 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 SLC30A1Q9Y6M5 507 aa9.63□□□□□ -0.87
VRK3-216ENST00000599342 LOC101059948A0A1B0GTJ6 334 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 PYCARD-AS1I3L0S3 204 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 APOC4-APOC2K7ER74 178 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 STX7O15400 261 aaKnown RBP9.62□□□□□ -0.87
VRK3-216ENST00000599342 GPR39O43194 453 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 BUD23O43709 281 aaKnown RBP9.62□□□□□ -0.87
VRK3-216ENST00000599342 ANXA9O76027 345 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 STK10O94804 968 aaKnown RBP9.62□□□□□ -0.87
VRK3-216ENST00000599342 LCA5LO95447 670 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 APOC2P02655 101 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 PRKAR1AP10644 381 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 BRAFP15056 766 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 ITGB6P18564 788 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 MSH3P20585 1137 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 PBLDP30039 288 aaPredicted RBP9.62□□□□□ -0.87
VRK3-216ENST00000599342 CCR10P46092 362 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 MARCKSL1P49006 195 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 NAP1L1P55209 391 aaKnown RBP9.62□□□□□ -0.87
VRK3-216ENST00000599342 POLE2P56282 527 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 COPS2P61201 443 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 MC1RQ01726 317 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 KCNC4Q03721 635 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 DMPKQ09013 629 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 CDC20Q12834 499 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 XRCC4Q13426 336 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 MAP7Q14244 749 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 GPR18Q14330 331 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 CLCA4Q14CN2 919 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 PLCL1Q15111 1095 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 LONRF2Q1L5Z9 754 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 CACHD1Q5VU97 1274 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 IRGCQ6NXR0 463 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 KLHL35Q6PF15 583 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 SARM1Q6SZW1 724 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 ATG14Q6ZNE5 492 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 BBS12Q6ZW61 710 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 PRSS42Q7Z5A4 293 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 RASGRP3Q8IV61 690 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 UNC5BQ8IZJ1 945 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 STARD8Q92502 1023 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 RSC1A1Q92681 617 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 STAMBPL1Q96FJ0 436 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 OR6C1Q96RD1 312 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 FICDQ9BVA6 458 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 HEMGNQ9BXL5 484 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 SLC40A1Q9NP59 571 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 SIDT1Q9NXL6 827 aaKnown RBP9.62□□□□□ -0.87
VRK3-216ENST00000599342 TMPRSS11EQ9UL52 423 aa9.62□□□□□ -0.87
VRK3-216ENST00000599342 TFR2Q9UP52 801 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms