RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PTPN7P35236 360 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 SPAM1P38567 509 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 ARSDP51689 593 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 DRG2P55039 364 aaKnown RBP13.55□□□□□ -0.24
SCAF1-203ENST00000598359 GEMP55040 296 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 GPLD1P80108 840 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 TMEM115Q12893 351 aaPredicted RBP13.55□□□□□ -0.24
SCAF1-203ENST00000598359 SQSTM1Q13501 440 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 SPARCL1Q14515 664 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 ANKRD20A2Q5SQ80 823 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 ANKRD20A1Q5TYW2 823 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 ANKRD20A3Q5VUR7 823 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 TMEM71Q6P5X7 295 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 CCDC81Q6ZN84 652 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 SLC9B2Q86UD5 537 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 TRAPPC5Q8IUR0 188 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 CDKL3Q8IVW4 592 aaPredicted RBP13.55□□□□□ -0.24
SCAF1-203ENST00000598359 OR10G6Q8NH81 332 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 ART4Q93070 314 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 TMEM159Q96B96 161 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 VPS35Q96QK1 796 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 CCNL2Q96S94 520 aaPredicted RBP13.55□□□□□ -0.24
SCAF1-203ENST00000598359 SRPK1Q96SB4 655 aaKnown RBP13.55□□□□□ -0.24
SCAF1-203ENST00000598359 TRABDQ9H4I3 376 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 OCIAD1Q9NX40 245 aa13.55□□□□□ -0.24
SCAF1-203ENST00000598359 AKAP7Q9P0M2 348 aaPredicted RBP13.55□□□□□ -0.24
SCAF1-203ENST00000598359 KIR2DS5A0A0G2JLQ3 304 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 A0A0G2JNG1 304 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 GLYATL1P3A0A0U1RQE8 302 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 OR52A4PA6NMU1 304 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 K7ENP7 123 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 KIR2DS3K7RE56 304 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 HGSO14964 777 aaPredicted RBP13.54□□□□□ -0.24
SCAF1-203ENST00000598359 DUX1O43812 170 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 VEGFDO43915 354 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 KIF5CO60282 957 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 SLU7O95391 586 aaKnown RBP13.54□□□□□ -0.24
SCAF1-203ENST00000598359 LIPCP11150 499 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 BRAFP15056 766 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 ADRA1AP35348 466 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 SLC19A1P41440 591 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 CTSCP53634 463 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 GNG11P61952 73 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 UBE2IP63279 158 aaKnown RBP13.54□□□□□ -0.24
SCAF1-203ENST00000598359 KIR2DS5Q14953 304 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 CLPPQ16740 277 aaPredicted RBP13.54□□□□□ -0.24
SCAF1-203ENST00000598359 ITPRIPL1Q6GPH6 555 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 INO80CQ6PI98 192 aaPredicted RBP13.54□□□□□ -0.24
SCAF1-203ENST00000598359 PEX26Q7Z412 305 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 C11orf96Q7Z7L8 435 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 FAM129CQ86XR2 697 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 RASGEF1AQ8N9B8 481 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 RNF31Q96EP0 1072 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 STN1Q9H668 368 aaKnown RBP13.54□□□□□ -0.24
SCAF1-203ENST00000598359 HACD3Q9P035 362 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 ZNF624Q9P2J8 865 aaPredicted RBP13.54□□□□□ -0.24
SCAF1-203ENST00000598359 ACSL6Q9UKU0 697 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 AMFRQ9UKV5 643 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 EFR3BQ9Y2G0 817 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 R3HDM2Q9Y2K5 976 aaKnown RBP13.54□□□□□ -0.24
SCAF1-203ENST00000598359 PKP3Q9Y446 797 aa13.54□□□□□ -0.24
SCAF1-203ENST00000598359 TCRBV7S2A1N4TA0A589 114 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 PRR19A6NJB7 356 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 EFCAB7A8K855 629 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 GPR89AB7ZAQ6 455 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 STX7O15400 261 aaKnown RBP13.53□□□□□ -0.24
SCAF1-203ENST00000598359 DDX3YO15523 660 aaKnown RBP13.53□□□□□ -0.24
SCAF1-203ENST00000598359 ANXA9O76027 345 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 TJP3O95049 919 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 GPR89BP0CG08 455 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 SLC2A4P14672 509 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 TYRP1P17643 537 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 WT1P19544 449 aaPredicted RBP13.53□□□□□ -0.24
SCAF1-203ENST00000598359 PBLDP30039 288 aaPredicted RBP13.53□□□□□ -0.24
SCAF1-203ENST00000598359 CASQ1P31415 396 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 CSTF2P33240 577 aaKnown RBP eCLIP13.53□□□□□ -0.24
SCAF1-203ENST00000598359 CLCNKAP51800 687 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 TRA2AQ13595 282 aaKnown RBP eCLIP13.53□□□□□ -0.24
SCAF1-203ENST00000598359 TUBB2AQ13885 445 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 TAF1BQ53T94 588 aaPredicted RBP13.53□□□□□ -0.24
SCAF1-203ENST00000598359 GPRC6AQ5T6X5 926 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 RANBP10Q6VN20 620 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 FAM83HQ6ZRV2 1179 aaPredicted RBP13.53□□□□□ -0.24
SCAF1-203ENST00000598359 DET1Q7L5Y6 550 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 TAB3Q8N5C8 712 aaPredicted RBP13.53□□□□□ -0.24
SCAF1-203ENST00000598359 AGBL5Q8NDL9 886 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 OR4K2Q8NGD2 314 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 CALR3Q96L12 384 aaKnown RBP13.53□□□□□ -0.24
SCAF1-203ENST00000598359 SPATA13Q96N96 652 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 CTRCQ99895 268 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 TIMM29Q9BSF4 260 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 TUBB2BQ9BVA1 445 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 SLC39A1Q9NY26 324 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 OGFRQ9NZT2 677 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 FKBPLQ9UIM3 349 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 WDR37Q9Y2I8 494 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 B3GALT1Q9Y5Z6 326 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 SLC30A1Q9Y6M5 507 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 CAPN6Q9Y6Q1 641 aa13.53□□□□□ -0.24
SCAF1-203ENST00000598359 OR2AG2A6NM03 316 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms