RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 MICALCLQ6ZW33 695 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 SLC9B2Q86UD5 537 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 SLITRK4Q8IW52 837 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 ACTRT1Q8TDG2 376 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 PRR11Q96HE9 360 aaPredicted RBP20.74■□□□□ 0.91
PNKP-209ENST00000596726 ZNF514Q96K75 400 aaPredicted RBP20.74■□□□□ 0.91
PNKP-209ENST00000596726 TMEM74Q96NL1 305 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 NAP1L3Q99457 506 aaPredicted RBP20.74■□□□□ 0.91
PNKP-209ENST00000596726 FOXP3Q9BZS1 431 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 FAM96AQ9H5X1 160 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 RIMKLBQ9ULI2 386 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 PYCARDQ9ULZ3 195 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 SATB2Q9UPW6 733 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 SLC30A1Q9Y6M5 507 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 IGLV3-16A0A075B6K0 115 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 CCDC187A0A096LP49 1063 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 OR2AG2A6NM03 316 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 CPNE6O95741 557 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 GAS8O95995 478 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 BRAFP15056 766 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 VCLP18206 1134 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 IDSP22304 550 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 ADRA1DP25100 572 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 AKT1P31749 480 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 CDKN1CP49918 316 aaPredicted RBP20.73■□□□□ 0.91
PNKP-209ENST00000596726 SKIDA1Q1XH10 827 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 CCDC38Q502W7 563 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 PIM3Q86V86 326 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 AMZ2Q86W34 360 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 WDR36Q8NI36 951 aaKnown RBP20.73■□□□□ 0.91
PNKP-209ENST00000596726 MAGOHBQ96A72 148 aaKnown RBP20.73■□□□□ 0.91
PNKP-209ENST00000596726 SGF29Q96ES7 293 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 CCDC97Q96F63 343 aaPredicted RBP20.73■□□□□ 0.91
PNKP-209ENST00000596726 AP1M1Q9BXS5 423 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 CPNE7Q9UBL6 633 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 PCDHGA8Q9Y5G5 932 aa20.73■□□□□ 0.91
PNKP-209ENST00000596726 HEATR9A2RTY3 570 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 PGRMC1O00264 195 aaKnown RBP20.72■□□□□ 0.91
PNKP-209ENST00000596726 TLX3O43711 291 aaPredicted RBP20.72■□□□□ 0.91
PNKP-209ENST00000596726 SLC19A1P41440 591 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 ARSDP51689 593 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 GPLD1P80108 840 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 CFHR1Q03591 330 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 LAMB3Q13751 1172 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 GSE1Q14687 1217 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 AMZ1Q400G9 498 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 BCL7AQ4VC05 210 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 C3orf38Q5JPI3 329 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 ZNF574Q6ZN55 896 aaPredicted RBP20.72■□□□□ 0.91
PNKP-209ENST00000596726 LSMEM2Q8N112 164 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 AVL9Q8NBF6 648 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 OR13J1Q8NGT2 312 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 HEXDCQ8WVB3 486 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 SH3KBP1Q96B97 665 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 LINC00615Q96LM1 132 aaPredicted RBP20.72■□□□□ 0.91
PNKP-209ENST00000596726 SLC38A3Q99624 504 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 COPS8Q99627 209 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 STN1Q9H668 368 aaKnown RBP20.72■□□□□ 0.91
PNKP-209ENST00000596726 RDH14Q9HBH5 336 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 ZDHHC3Q9NYG2 299 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 KCNK4Q9NYG8 393 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 SMARCAL1Q9NZC9 954 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 ZNF624Q9P2J8 865 aaPredicted RBP20.72■□□□□ 0.91
PNKP-209ENST00000596726 RAXQ9Y2V3 346 aa20.72■□□□□ 0.91
PNKP-209ENST00000596726 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.71■□□□□ 0.91
PNKP-209ENST00000596726 PDZK1P1A8MUH7 402 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 PRSS56P0CW18 603 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 TPSB2P20231 275 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 ACRV1P26436 265 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 RPL10P27635 214 aaKnown RBP20.71■□□□□ 0.91
PNKP-209ENST00000596726 COILP38432 576 aaPredicted RBP20.71■□□□□ 0.91
PNKP-209ENST00000596726 BASP1P80723 227 aaKnown RBP20.71■□□□□ 0.91
PNKP-209ENST00000596726 ACVR1Q04771 509 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 CACNG1Q06432 222 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 EIF3IQ13347 325 aaKnown RBP20.71■□□□□ 0.91
PNKP-209ENST00000596726 TPSAB1Q15661 275 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 KCTD19Q17RG1 926 aaPredicted RBP20.71■□□□□ 0.91
PNKP-209ENST00000596726 MAP9Q49MG5 647 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 ZRANB3Q5FWF4 1079 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 FNBP1LQ5T0N5 605 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 TSTD2Q5T7W7 516 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 FAM83HQ6ZRV2 1179 aaPredicted RBP20.71■□□□□ 0.91
PNKP-209ENST00000596726 USP53Q70EK8 1073 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 DET1Q7L5Y6 550 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 SERPINA9Q86WD7 417 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 ZNF761Q86XN6 746 aaPredicted RBP20.71■□□□□ 0.91
PNKP-209ENST00000596726 PIANPQ8IYJ0 282 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 BEND7Q8N7W2 519 aaPredicted RBP20.71■□□□□ 0.91
PNKP-209ENST00000596726 NUDT22Q9BRQ3 303 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 STRADBQ9C0K7 418 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 SEMA6CQ9H3T2 930 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 UCK1Q9HA47 277 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 EPB41L5Q9HCM4 733 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 ASCL3Q9NQ33 180 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 WDR37Q9Y2I8 494 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 TCAF1Q9Y4C2 921 aa20.71■□□□□ 0.91
PNKP-209ENST00000596726 CELSR3Q9NYQ7 3312 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 DSPP15924 2871 aaKnown RBP20.7■□□□□ 0.9
PNKP-209ENST00000596726 CCDC78A2IDD5 438 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 PMS2P1A4D2B8 440 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms