RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 SAYSD1Q9NPB0 183 aa10.42□□□□□ -0.74
LIG1-210ENST00000596332 CATSPERZQ9NTU4 200 aa10.42□□□□□ -0.74
LIG1-210ENST00000596332 SCHIP1Q9P0W5 487 aaPredicted RBP10.42□□□□□ -0.74
LIG1-210ENST00000596332 GALPQ9UBC7 116 aa10.42□□□□□ -0.74
LIG1-210ENST00000596332 ZC3H7BQ9UGR2 993 aaKnown RBP10.42□□□□□ -0.74
LIG1-210ENST00000596332 APOBEC3BQ9UH17 382 aaKnown RBP10.42□□□□□ -0.74
LIG1-210ENST00000596332 GPR34Q9UPC5 381 aa10.42□□□□□ -0.74
LIG1-210ENST00000596332 PSAT1Q9Y617 370 aa10.42□□□□□ -0.74
LIG1-210ENST00000596332 ASCC3Q8N3C0 2202 aaKnown RBP10.42□□□□□ -0.74
LIG1-210ENST00000596332 CEP250Q9BV73 2442 aa10.42□□□□□ -0.74
LIG1-210ENST00000596332 DCHS1Q96JQ0 3298 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 OR2AG2A6NM03 316 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 GPR89AB7ZAQ6 455 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 LMO7DNF2Z398 122 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 CASC3O15234 703 aaKnown RBP10.41□□□□□ -0.74
LIG1-210ENST00000596332 NOBOXO60393 691 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 FOXD2O60548 495 aaPredicted RBP10.41□□□□□ -0.74
LIG1-210ENST00000596332 POP7O75817 140 aaKnown RBP10.41□□□□□ -0.74
LIG1-210ENST00000596332 HAUS5O94927 633 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 TTC4O95801 387 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 AHSGP02765 367 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 GPR89BP0CG08 455 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 MYF5P13349 255 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 ATP1B2P14415 290 aaPredicted RBP10.41□□□□□ -0.74
LIG1-210ENST00000596332 BRAFP15056 766 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 ZNF7P17097 686 aaPredicted RBP10.41□□□□□ -0.74
LIG1-210ENST00000596332 TNFRSF8P28908 595 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 PRLHRP49683 370 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 CCT8P50990 548 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 PRAMEP78395 509 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 DMPKQ09013 629 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 ITIH4Q14624 930 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 KYNUQ16719 465 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 LONRF1Q17RB8 773 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 PROX2Q3B8N5 592 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 AASDHQ4L235 1098 aaPredicted RBP10.41□□□□□ -0.74
LIG1-210ENST00000596332 FASTKD1Q53R41 847 aaKnown RBP10.41□□□□□ -0.74
LIG1-210ENST00000596332 TEX35Q5T0J7 233 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 CCNI2Q6ZMN8 369 aaPredicted RBP10.41□□□□□ -0.74
LIG1-210ENST00000596332 DET1Q7L5Y6 550 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 CCNJLQ8IV13 435 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 C2CD4AQ8NCU7 369 aaPredicted RBP10.41□□□□□ -0.74
LIG1-210ENST00000596332 ACVR1CQ8NER5 493 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 LMX1AQ8TE12 382 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 CERS2Q96G23 380 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 OR2M4Q96R27 311 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 NAT9Q9BTE0 207 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 FAM129AQ9BZQ8 928 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 C20orf96Q9NUD7 363 aaPredicted RBP10.41□□□□□ -0.74
LIG1-210ENST00000596332 NINJ2Q9NZG7 142 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 SAMD15Q9P1V8 674 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 TBC1D29Q9UFV1 150 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 ZNHIT2Q9UHR6 403 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 CRLS1Q9UJA2 301 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 PCOLCE2Q9UKZ9 415 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 CDYLQ9Y232 598 aa10.41□□□□□ -0.74
LIG1-210ENST00000596332 TCRBV9S1A1TA0A576 114 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 FAM159BA6NKW6 160 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 IQCF5A8MTL0 148 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 TPP1O14773 563 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 NDC80O14777 642 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 SLC30A4O14863 429 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 YKT6O15498 198 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 SIGLEC6O43699 453 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 OGNP20774 298 aaKnown RBP10.4□□□□□ -0.74
LIG1-210ENST00000596332 RPS3P23396 243 aaKnown RBP eCLIP10.4□□□□□ -0.74
LIG1-210ENST00000596332 NSG1P42857 185 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 SLC1A2P43004 574 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 LEPRP48357 1165 aaKnown RBP10.4□□□□□ -0.74
LIG1-210ENST00000596332 ARRB1P49407 418 aaPredicted RBP10.4□□□□□ -0.74
LIG1-210ENST00000596332 BLKP51451 505 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 ADARP55265 1226 aaKnown RBP10.4□□□□□ -0.74
LIG1-210ENST00000596332 ARHGAP8P85298 464 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 MPP1Q00013 466 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 CUL1Q13616 776 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 ERCC6LQ2NKX8 1250 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 DEFB133Q30KQ1 61 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 CNSTQ6PJW8 725 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 CRTC3Q6UUV7 619 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 CERS6Q6ZMG9 384 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 CHST15Q7LFX5 561 aaPredicted RBP10.4□□□□□ -0.74
LIG1-210ENST00000596332 LRRTM4Q86VH4 590 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 KCNMB4Q86W47 210 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 IFT20Q8IY31 132 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 GSPT2Q8IYD1 628 aaKnown RBP10.4□□□□□ -0.74
LIG1-210ENST00000596332 NAGSQ8N159 534 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 EID2Q8N6I1 236 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 EIF1ADQ8N9N8 165 aaKnown RBP10.4□□□□□ -0.74
LIG1-210ENST00000596332 GPR156Q8NFN8 814 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 OR4C6Q8NH72 309 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 PYROXD1Q8WU10 500 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 PATE1Q8WXA2 126 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 CFAP36Q96G28 342 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 TCF12Q99081 682 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 SLC30A3Q99726 388 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 SLC13A1Q9BZW2 595 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 LATS2Q9NRM7 1088 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 IARS2Q9NSE4 1012 aaKnown RBP10.4□□□□□ -0.74
LIG1-210ENST00000596332 TOR4AQ9NXH8 423 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 DLL3Q9NYJ7 618 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms