RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 PPARGP37231 505 aaPredicted RBP14.14□□□□□ -0.15
LIG1-208ENST00000595758 CLCNKAP51800 687 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 ARL4CP56559 192 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 DHX9Q08211 1270 aaKnown RBP14.14□□□□□ -0.15
LIG1-208ENST00000595758 ITIH4Q14624 930 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 HIF1AQ16665 826 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 MSS51Q4VC12 460 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 KIAA0930Q6ICG6 404 aaPredicted RBP14.14□□□□□ -0.15
LIG1-208ENST00000595758 C11orf96Q7Z7L8 435 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 SLCO6A1Q86UG4 719 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 AMZ2Q86W34 360 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 CEP112Q8N8E3 955 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 PNPLA1Q8N8W4 532 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 ZDHHC1Q8WTX9 485 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 NAT14Q8WUY8 206 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 ZNF669Q96BR6 464 aaPredicted RBP14.14□□□□□ -0.15
LIG1-208ENST00000595758 CCDC97Q96F63 343 aaPredicted RBP14.14□□□□□ -0.15
LIG1-208ENST00000595758 PWWP2AQ96N64 755 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 FCRL3Q96P31 734 aaPredicted RBP14.14□□□□□ -0.15
LIG1-208ENST00000595758 EBNA1BP2Q99848 306 aaKnown RBP14.14□□□□□ -0.15
LIG1-208ENST00000595758 TRIM56Q9BRZ2 755 aaKnown RBP14.14□□□□□ -0.15
LIG1-208ENST00000595758 NAT9Q9BTE0 207 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 LRRC1Q9BTT6 524 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 OSGEPL1Q9H4B0 414 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 MARCH4Q9P2E8 410 aaPredicted RBP14.14□□□□□ -0.15
LIG1-208ENST00000595758 TBC1D29Q9UFV1 150 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 PADI4Q9UM07 663 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 DNAJC16Q9Y2G8 782 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 U3KQA8 63 aa14.14□□□□□ -0.15
LIG1-208ENST00000595758 SGTAO43765 313 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 NOBOXO60393 691 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 SNX2O60749 519 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 BANF1O75531 89 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 USP1O94782 785 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 POLBP06746 335 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 PGAM1P18669 254 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 ARNTP27540 789 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 PMLP29590 882 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 NSG1P42857 185 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 ARCN1P48444 511 aaKnown RBP14.13□□□□□ -0.15
LIG1-208ENST00000595758 ACADVLP49748 655 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 SLC7A5Q01650 507 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 ILKQ13418 452 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 SEMA3AQ14563 771 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 BCL7AQ4VC05 210 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 N4BP2L1Q5TBK1 243 aaPredicted RBP14.13□□□□□ -0.15
LIG1-208ENST00000595758 MRNIPQ6NTE8 343 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 PACS1Q6VY07 963 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 SDCCAG8Q86SQ7 713 aaPredicted RBP14.13□□□□□ -0.15
LIG1-208ENST00000595758 LDB1Q86U70 411 aaPredicted RBP14.13□□□□□ -0.15
LIG1-208ENST00000595758 SFTPA2Q8IWL1 248 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 CLDN19Q8N6F1 224 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 OTUD6BQ8N6M0 293 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 BEND7Q8N7W2 519 aaPredicted RBP14.13□□□□□ -0.15
LIG1-208ENST00000595758 NOA1Q8NC60 698 aaKnown RBP14.13□□□□□ -0.15
LIG1-208ENST00000595758 GPR156Q8NFN8 814 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 TOR4AQ9NXH8 423 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 GRHL1Q9NZI5 618 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 PCDHGA1Q9Y5H4 931 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 DNAH14Q0VDD8 3507 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 PLXNB3Q9ULL4 1909 aa14.13□□□□□ -0.15
LIG1-208ENST00000595758 ARHGEF17Q96PE2 2063 aaPredicted RBP14.12□□□□□ -0.15
LIG1-208ENST00000595758 ZCWPW2A0A1B0GU75 182 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 EME2A4GXA9 379 aaPredicted RBP14.12□□□□□ -0.15
LIG1-208ENST00000595758 MGAT4DA6NG13 374 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 GOLGA8KD6RF30 607 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 GOLGA8TH3BQL2 631 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 OR1I1O60431 355 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 RFPL3O75679 317 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 AP2A2O94973 939 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 TTC4O95801 387 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 EML2O95834 649 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 IDSP22304 550 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 PBLDP30039 288 aaPredicted RBP14.12□□□□□ -0.15
LIG1-208ENST00000595758 ELK3P41970 407 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 TTPAP49638 278 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 DRG2P55039 364 aaKnown RBP14.12□□□□□ -0.15
LIG1-208ENST00000595758 CAV1Q03135 178 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 SMAD1Q15797 465 aaKnown RBP14.12□□□□□ -0.15
LIG1-208ENST00000595758 C14orf28Q4W4Y0 310 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 HP1BP3Q5SSJ5 553 aaPredicted RBP14.12□□□□□ -0.15
LIG1-208ENST00000595758 NEPROQ6NW34 567 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 GUSBP11Q6P575 273 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 EFL1Q7Z2Z2 1120 aaKnown RBP14.12□□□□□ -0.15
LIG1-208ENST00000595758 CCNJLQ8IV13 435 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 IGDCC3Q8IVU1 814 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 OR6C4Q8NGE1 309 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 IFI44Q8TCB0 444 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 NAT6Q93015 286 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 LRRC39Q96DD0 335 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 LINC00615Q96LM1 132 aaPredicted RBP14.12□□□□□ -0.15
LIG1-208ENST00000595758 VPS37BQ9H9H4 285 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 PRDM8Q9NQV8 689 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 FAM169AQ9Y6X4 670 aa14.12□□□□□ -0.15
LIG1-208ENST00000595758 TRBV23OR9-2A0A075B6M9 112 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 KLHL33A6NCF5 533 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 PRR19A6NJB7 356 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 PDZK1P1A8MUH7 402 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 F8W8V4 182 aa14.11□□□□□ -0.15
LIG1-208ENST00000595758 ZNF500O60304 480 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms