RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 CD82P27701 267 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 FDFT1P37268 417 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 ZNF140P52738 457 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 UBE2IP63279 158 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 TLE3Q04726 772 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 NFATC2Q13469 925 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 LAMB3Q13751 1172 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 OASLQ15646 514 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 PLA2G4EQ3MJ16 856 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 GPR33Q49SQ1 333 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 KHDC1Q4VXA5 237 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 TMEM71Q6P5X7 295 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 ABRAXAS1Q6UWZ7 409 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 USP53Q70EK8 1073 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 AMZ2Q86W34 360 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 JAMLQ86YT9 394 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 AGBL5Q8NDL9 886 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 CCDC74BQ96LY2 380 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 SEMA6CQ9H3T2 930 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 ASB8Q9H765 288 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 PRDM8Q9NQV8 689 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 ZNF148Q9UQR1 794 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 DNAJC16Q9Y2G8 782 aa17.46■□□□□ 0.39
SHKBP1-204ENST00000594862 TCRBV7S2A1N4TA0A589 114 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 GAPDHSO14556 408 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 METTL18O95568 372 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 THRAP10827 490 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 TMPRSS3P57727 454 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 CCZ1BP86790 482 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 CCZ1P86791 482 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 DENND5AQ6IQ26 1287 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 C4orf22Q6V702 233 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 C11orf96Q7Z7L8 435 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 CCDC89Q8N998 374 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 RASGEF1AQ8N9B8 481 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 ATG4AQ8WYN0 398 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 DCUN1D1Q96GG9 259 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 FKBPLQ9UIM3 349 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 CRLS1Q9UJA2 301 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 SLC30A1Q9Y6M5 507 aa17.45■□□□□ 0.38
SHKBP1-204ENST00000594862 TRBV23OR9-2A0A075B6M9 112 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 AGAP14A8MT82 685 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 H7C0S8 307 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 UGT1A9O60656 530 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 UGT1A6P19224 532 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 UGT1A1P22309 533 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 UGT1A4P22310 534 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 ITPKBP27987 946 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 CSF2RBP32927 897 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 CSTF2P33240 577 aaKnown RBP eCLIP17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 UGT1A3P35503 534 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 GDF10P55107 478 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 MSLNQ13421 630 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 DRICH1Q6PGQ1 229 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 TMPRSS9Q7Z410 1059 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 SNX20Q7Z614 316 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 BEND7Q8N7W2 519 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 CXorf40BQ96DE9 158 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 UGT1A7Q9HAW7 530 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 UGT1A10Q9HAW8 530 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 UGT1A8Q9HAW9 530 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 HOMER3Q9NSC5 361 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 PDP2Q9P2J9 529 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 SLC23A2Q9UGH3 650 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 PPP2R2CQ9Y2T4 447 aa17.44■□□□□ 0.38
SHKBP1-204ENST00000594862 GCN1Q92616 2671 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 E7EVH7 732 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 KLK10O43240 276 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 LDB2O43679 373 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 POP7O75817 140 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 IFNB1P01574 187 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 SLC5A2P31639 672 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 LMAN1P49257 510 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 CDH17Q12864 832 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 OLIG2Q13516 323 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 SPARCL1Q14515 664 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 C16orf72Q14CZ0 275 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 CCNG2Q16589 344 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 KIF26BQ2KJY2 2108 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 BCL7AQ4VC05 210 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 NKAIN2Q5VXU1 208 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 TMEM220Q6QAJ8 160 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 ZNF574Q6ZN55 896 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 TMEM26Q6ZUK4 368 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 PLXDC1Q8IUK5 500 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 NXPE1Q8N323 547 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 STYXQ8WUJ0 223 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 COPS8Q99627 209 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 VPS37BQ9H9H4 285 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 NLE1Q9NVX2 485 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 PAK5Q9P286 719 aa17.43■□□□□ 0.38
SHKBP1-204ENST00000594862 PMS2P1A4D2B8 440 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 MGAT4DA6NG13 374 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 OR2AG2A6NM03 316 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 LIPCP11150 499 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 HGFP14210 728 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 CTSCP53634 463 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 RAB15P59190 212 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 XIAPP98170 497 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms