RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 SARNPP82979 210 aaKnown RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 DMPKQ09013 629 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 PPP1R7Q15435 360 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 BCL7AQ4VC05 210 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 IYDQ6PHW0 289 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 AFTPHQ6ULP2 937 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 RBM44Q6ZP01 1051 aaKnown RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 TAS2R42Q7RTR8 314 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 AMZ2Q86W34 360 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 PIANPQ8IYJ0 282 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 BEND7Q8N7W2 519 aaPredicted RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 NAT14Q8WUY8 206 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 HEXDCQ8WVB3 486 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 SLCO2A1Q92959 643 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 HDAC10Q969S8 669 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 SGF29Q96ES7 293 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 SYBUQ9NX95 663 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 ZDHHC3Q9NYG2 299 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 BFARQ9NZS9 450 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 DNMT3AQ9Y6K1 912 aaPredicted RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 TRBV23OR9-2A0A075B6M9 112 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 KIR2DS5A0A0G2JLQ3 304 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 A0A0G2JNG1 304 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 OR5K4A6NMS3 321 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 PDZK1P1A8MUH7 402 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 D6RAR5 112 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 CFAP99D6REC4 459 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 KIR2DS3K7RE56 304 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 KCNJ13O60928 360 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 POP7O75817 140 aaKnown RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 GOT2P00505 430 aaKnown RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 ATP1B2P14415 290 aaPredicted RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 PAFAH1B1P43034 410 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 GPR3P46089 330 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 PRLHRP49683 370 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 PDX1P52945 283 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 ETF1P62495 437 aaKnown RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 PRAMEP78395 509 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 HHEXQ03014 270 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 KIR2DS5Q14953 304 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 SEPT7Q16181 437 aaKnown RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 SARS2Q9NP81 518 aaKnown RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 CHRAC1Q9NRG0 131 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 RNF14Q9UBS8 474 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 PCDHB1Q9Y5F3 818 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 WDFY3Q8IZQ1 3526 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 TRABD2BA6NFA1 517 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 CCDC188H7C350 402 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 IDSP22304 550 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 RPL10P27635 214 aaKnown RBP14.31□□□□□ -0.12
VRK3-206ENST00000594090 ALDH4A1P30038 563 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 CASQ1P31415 396 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 PTGIRP43119 386 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 OR1D5P58170 312 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 PTK6Q13882 451 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 NFE2L1Q14494 772 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 DBN1Q16643 649 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 ISXQ2M1V0 245 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 AGAP9Q5VTM2 703 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 ABRAXAS1Q6UWZ7 409 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 WASH2PQ6VEQ5 465 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 SYT10Q6XYQ8 523 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 FAM83HQ6ZRV2 1179 aaPredicted RBP14.31□□□□□ -0.12
VRK3-206ENST00000594090 SLC9B2Q86UD5 537 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 CAND1Q86VP6 1230 aaKnown RBP14.31□□□□□ -0.12
VRK3-206ENST00000594090 KLHL7Q8IXQ5 586 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 NAT8LQ8N9F0 302 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 MCUQ8NE86 351 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.31□□□□□ -0.12
VRK3-206ENST00000594090 LINC00615Q96LM1 132 aaPredicted RBP14.31□□□□□ -0.12
VRK3-206ENST00000594090 RUNDC3BQ96NL0 473 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 GFM1Q96RP9 751 aaKnown RBP14.31□□□□□ -0.12
VRK3-206ENST00000594090 STN1Q9H668 368 aaKnown RBP14.31□□□□□ -0.12
VRK3-206ENST00000594090 MRM3Q9HC36 420 aaKnown RBP14.31□□□□□ -0.12
VRK3-206ENST00000594090 WASH6PQ9NQA3 447 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 TREX1Q9NSU2 369 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 SCHIP1Q9P0W5 487 aaPredicted RBP14.31□□□□□ -0.12
VRK3-206ENST00000594090 CPNE7Q9UBL6 633 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 ASIC3Q9UHC3 531 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 SOX13Q9UN79 622 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 ENTPD2Q9Y5L3 495 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 ASPMQ8IZT6 3477 aa14.31□□□□□ -0.12
VRK3-206ENST00000594090 KLHL33A6NCF5 533 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 MGAT4DA6NG13 374 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 B4GAT1O43505 415 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 AVILO75366 819 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 MLNP12872 115 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 BRAFP15056 766 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 NMBRP28336 390 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 DRG2P55039 364 aaKnown RBP14.3□□□□□ -0.12
VRK3-206ENST00000594090 UBE2IP63279 158 aaKnown RBP14.3□□□□□ -0.12
VRK3-206ENST00000594090 ITIH4Q14624 930 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 RNASEH2BQ5TBB1 312 aaKnown RBP14.3□□□□□ -0.12
VRK3-206ENST00000594090 PACS1Q6VY07 963 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 ZNF761Q86XN6 746 aaPredicted RBP14.3□□□□□ -0.12
VRK3-206ENST00000594090 PPIL6Q8IXY8 311 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 AVL9Q8NBF6 648 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 OR6P1Q8NGX9 317 aa14.3□□□□□ -0.12
VRK3-206ENST00000594090 OR2L2Q8NH16 312 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms