RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 GSDMBQ8TAX9 411 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 ETNPPLQ8TBG4 499 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 CREB3L4Q8TEY5 395 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 UCMAQ8WVF2 138 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 SYAP1Q96A49 352 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 MKKSQ9NPJ1 570 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 CD93Q9NPY3 652 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 CNGB3Q9NQW8 809 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 ASAH2Q9NR71 780 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 ORC3Q9UBD5 711 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 CTNNA3Q9UI47 895 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 SLCO3A1Q9UIG8 710 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 ZNF580Q9UK33 172 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 ZHX1Q9UKY1 873 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 INTS6Q9UL03 887 aaKnown RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 PCDHGB1Q9Y5G3 927 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 NFS1Q9Y697 457 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 STON1Q9Y6Q2 735 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 ADAMTS7Q9UKP4 1686 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 SBNO1A3KN83 1393 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 IGLV5-37A0A075B6J1 123 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 AKR1B15C9JRZ8 316 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-216ENST00000593223 TAF4O00268 1085 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 HSPA4LO95757 839 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 CYC1P08574 325 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 THEGLP0DJG4 465 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 FGF3P11487 239 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-216ENST00000593223 ALOX12P18054 663 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 ATP5DP30049 168 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 EIF2S3P41091 472 aaKnown RBP4.9□□□□□ -1.63
SMAD4-216ENST00000593223 TNNT3P45378 269 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-216ENST00000593223 CALD1Q05682 793 aaKnown RBP4.9□□□□□ -1.63
SMAD4-216ENST00000593223 GOLGA8DPQ0D2H9 430 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 FRG1Q14331 258 aaKnown RBP4.9□□□□□ -1.63
SMAD4-216ENST00000593223 BECN1Q14457 450 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 EFNB3Q15768 340 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 TBCEQ15813 527 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-216ENST00000593223 C2orf68Q2NKX9 166 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 AMZ1Q400G9 498 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 PPP6R3Q5H9R7 873 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-216ENST00000593223 RHBDF2Q6PJF5 856 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 MTSS1LQ765P7 747 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 NLRP14Q86W24 1093 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 TRIML1Q8N9V2 468 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 CSF3RQ99062 836 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 PI4K2AQ9BTU6 479 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 IFIH1Q9BYX4 1025 aaKnown RBP4.9□□□□□ -1.63
SMAD4-216ENST00000593223 TXLNGYQ9BZA5 131 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 SLCO5A1Q9H2Y9 848 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 NOX4Q9NPH5 578 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 WWOXQ9NZC7 414 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 RABL2AQ9UBK7 228 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-216ENST00000593223 MALT1Q9UDY8 824 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 MTF2Q9Y483 593 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-216ENST00000593223 CEPT1Q9Y6K0 416 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 CAPN7Q9Y6W3 813 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 KANK1Q14678 1352 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 KIAA0232Q92628 1395 aa4.9□□□□□ -1.63
SMAD4-216ENST00000593223 SSH2Q76I76 1423 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 FMN2Q9NZ56 1722 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 NPIPB15A6NHN6 443 aaPredicted RBP4.89□□□□□ -1.63
SMAD4-216ENST00000593223 PI4K2BG5E9Z4 385 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 NDC80O14777 642 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 IPO8O15397 1037 aaKnown RBP4.89□□□□□ -1.63
SMAD4-216ENST00000593223 NDUFS7O75251 213 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 GAGE7O76087 117 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 STARD3NLO95772 234 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 GAGE12FP0CL80 117 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 GAGE12GP0CL81 117 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 GAGE12IP0CL82 117 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 IGHV4-30-4P0DP06 118 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 DAOP14920 347 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 CCKBRP32239 447 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 PRPHP41219 470 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 PIP4K2AP48426 406 aaPredicted RBP4.89□□□□□ -1.63
SMAD4-216ENST00000593223 OLR1P78380 273 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 UBXN1Q04323 297 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 TMEM115Q12893 351 aaPredicted RBP4.89□□□□□ -1.63
SMAD4-216ENST00000593223 GAGE1Q13065 139 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 GAGE4Q13068 117 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 SF3B4Q15427 424 aaKnown RBP eCLIP4.89□□□□□ -1.63
SMAD4-216ENST00000593223 ALG11Q2TAA5 492 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 EIF2S3LQ2VIR3 472 aaKnown RBP4.89□□□□□ -1.63
SMAD4-216ENST00000593223 DPCR1Q3MIW9 517 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 FAM69BQ5VUD6 431 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 ANKRD54Q6NXT1 300 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 METTL2BQ6P1Q9 378 aaKnown RBP4.89□□□□□ -1.63
SMAD4-216ENST00000593223 WDR73Q6P4I2 378 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 SLC36A4Q6YBV0 504 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 QSOX2Q6ZRP7 698 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 RAPH1Q70E73 1250 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 TAOK1Q7L7X3 1001 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 EPHX4Q8IUS5 362 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 IQCF2Q8IXL9 164 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 CCDC13Q8IYE1 715 aa4.89□□□□□ -1.63
SMAD4-216ENST00000593223 RNF168Q8IYW5 571 aaPredicted RBP4.89□□□□□ -1.63
SMAD4-216ENST00000593223 TDRD7Q8NHU6 1098 aaKnown RBP4.89□□□□□ -1.63
SMAD4-216ENST00000593223 PSPC1Q8WXF1 523 aaKnown RBP4.89□□□□□ -1.63
SMAD4-216ENST00000593223 RND1Q92730 232 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms