RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 XRCC1P18887 633 aaPredicted RBP16.59■□□□□ 0.25
AP3D1-212ENST00000592488 IDSP22304 550 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 MPSTP25325 297 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 PDE1BQ01064 536 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 CLN3Q13286 438 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 SEPT7Q16181 437 aaKnown RBP16.59■□□□□ 0.25
AP3D1-212ENST00000592488 PARP6Q2NL67 630 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 SOWAHCQ53LP3 525 aaPredicted RBP16.59■□□□□ 0.25
AP3D1-212ENST00000592488 SEL1L2Q5TEA6 688 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 TMEM164Q5U3C3 297 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 AGAP9Q5VTM2 703 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 DENND5AQ6IQ26 1287 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 WDR74Q6RFH5 385 aaPredicted RBP16.59■□□□□ 0.25
AP3D1-212ENST00000592488 TRIM48Q8IWZ4 208 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 KLHDC8BQ8IXV7 354 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 AGBL5Q8NDL9 886 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 OR4K2Q8NGD2 314 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 ZNF398Q8TD17 642 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 UBL7Q96S82 380 aaPredicted RBP16.59■□□□□ 0.25
AP3D1-212ENST00000592488 B3GNT4Q9C0J1 378 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 EPB41L1Q9H4G0 881 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 ARNT2Q9HBZ2 717 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 CPNE5Q9HCH3 593 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 SCHIP1Q9P0W5 487 aaPredicted RBP16.59■□□□□ 0.25
AP3D1-212ENST00000592488 FEZ2Q9UHY8 353 aaPredicted RBP16.59■□□□□ 0.25
AP3D1-212ENST00000592488 FKBPLQ9UIM3 349 aa16.59■□□□□ 0.25
AP3D1-212ENST00000592488 TEX51A0A1B0GUA7 166 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 KCNJ13O60928 360 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 VIPP01282 170 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 CCL4P13236 92 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 AKT1P31749 480 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 CSTF2P33240 577 aaKnown RBP eCLIP16.58■□□□□ 0.24
AP3D1-212ENST00000592488 CA5AP35218 305 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 MAPK9P45984 424 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 CTSCP53634 463 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 SPARCL1Q14515 664 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 P3H1Q32P28 736 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 ABRAXAS1Q6UWZ7 409 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 WASH2PQ6VEQ5 465 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 AMZ2Q86W34 360 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 RASGEF1AQ8N9B8 481 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 USP7Q93009 1102 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 TMEM121Q9BTD3 319 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 LRRC40Q9H9A6 602 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 UCK1Q9HA47 277 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 WASH6PQ9NQA3 447 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 FOXJ2Q9P0K8 574 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 PDP2Q9P2J9 529 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 KCTD3Q9Y597 815 aa16.58■□□□□ 0.24
AP3D1-212ENST00000592488 C9orf172C9J069 976 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 SRP72O76094 671 aaKnown RBP16.57■□□□□ 0.24
AP3D1-212ENST00000592488 METTL18O95568 372 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 LIPCP11150 499 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 BRAFP15056 766 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 MSH3P20585 1137 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 RPL10P27635 214 aaKnown RBP16.57■□□□□ 0.24
AP3D1-212ENST00000592488 CD82P27701 267 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 SLC19A1P41440 591 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 ZNF140P52738 457 aaPredicted RBP16.57■□□□□ 0.24
AP3D1-212ENST00000592488 DRG2P55039 364 aaKnown RBP16.57■□□□□ 0.24
AP3D1-212ENST00000592488 GDF10P55107 478 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 DMPKQ09013 629 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 MSLNQ13421 630 aaPredicted RBP16.57■□□□□ 0.24
AP3D1-212ENST00000592488 LONRF2Q1L5Z9 754 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 ARHGAP40Q5TG30 622 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 KCTD11Q693B1 232 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 TMEM220Q6QAJ8 160 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 TMEM26Q6ZUK4 368 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 ATG4AQ8WYN0 398 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 NCSTNQ92542 709 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 ZNF514Q96K75 400 aaPredicted RBP16.57■□□□□ 0.24
AP3D1-212ENST00000592488 BBC3Q96PG8 261 aaPredicted RBP16.57■□□□□ 0.24
AP3D1-212ENST00000592488 C19orf43Q9BQ61 176 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 TBC1D10AQ9BXI6 508 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 FRMD8P1Q9BZ68 369 aaPredicted RBP16.57■□□□□ 0.24
AP3D1-212ENST00000592488 ASB8Q9H765 288 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 POT1Q9NUX5 634 aa16.57■□□□□ 0.24
AP3D1-212ENST00000592488 ZNF624Q9P2J8 865 aaPredicted RBP16.57■□□□□ 0.24
AP3D1-212ENST00000592488 OR2AG2A6NM03 316 aa16.56■□□□□ 0.24
AP3D1-212ENST00000592488 OR52A4PA6NMU1 304 aa16.56■□□□□ 0.24
AP3D1-212ENST00000592488 POP7O75817 140 aaKnown RBP16.56■□□□□ 0.24
AP3D1-212ENST00000592488 FGF3P11487 239 aaPredicted RBP16.56■□□□□ 0.24
AP3D1-212ENST00000592488 HADHAP40939 763 aa16.56■□□□□ 0.24
AP3D1-212ENST00000592488 HALP42357 657 aa16.56■□□□□ 0.24
AP3D1-212ENST00000592488 VAC14Q08AM6 782 aa16.56■□□□□ 0.24
AP3D1-212ENST00000592488 SNAP47Q5SQN1 464 aa16.56■□□□□ 0.24
AP3D1-212ENST00000592488 RBM12BQ8IXT5 1001 aaKnown RBP16.56■□□□□ 0.24
AP3D1-212ENST00000592488 OR13C4Q8NGS5 318 aa16.56■□□□□ 0.24
AP3D1-212ENST00000592488 CXorf40BQ96DE9 158 aa16.56■□□□□ 0.24
AP3D1-212ENST00000592488 RTP4Q96DX8 246 aa16.56■□□□□ 0.24
AP3D1-212ENST00000592488 TAAR9Q96RI9 348 aa16.56■□□□□ 0.24
AP3D1-212ENST00000592488 CCNL2Q96S94 520 aaPredicted RBP16.56■□□□□ 0.24
AP3D1-212ENST00000592488 WDR70Q9NW82 654 aa16.56■□□□□ 0.24
AP3D1-212ENST00000592488 PCDHGA3Q9Y5H0 932 aa16.56■□□□□ 0.24
AP3D1-212ENST00000592488 DNMT3AQ9Y6K1 912 aaPredicted RBP16.56■□□□□ 0.24
AP3D1-212ENST00000592488 MN1Q10571 1320 aaPredicted RBP16.55■□□□□ 0.24
AP3D1-212ENST00000592488 B4E171 279 aa16.55■□□□□ 0.24
AP3D1-212ENST00000592488 PSMD3O43242 534 aa16.55■□□□□ 0.24
AP3D1-212ENST00000592488 LDB2O43679 373 aa16.55■□□□□ 0.24
AP3D1-212ENST00000592488 AP2A1O95782 977 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms