RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 C7orf26Q96N11 449 aa12.83□□□□□ -0.36
PTBP1-216ENST00000590887 SGK2Q9HBY8 427 aa12.83□□□□□ -0.36
PTBP1-216ENST00000590887 TRIM39Q9HCM9 518 aa12.83□□□□□ -0.36
PTBP1-216ENST00000590887 ARHGEF3Q9NR81 526 aa12.83□□□□□ -0.36
PTBP1-216ENST00000590887 KLHL14Q9P2G3 628 aa12.83□□□□□ -0.36
PTBP1-216ENST00000590887 RNF112Q9ULX5 631 aa12.83□□□□□ -0.36
PTBP1-216ENST00000590887 NDRG2Q9UN36 371 aaKnown RBP12.83□□□□□ -0.36
PTBP1-216ENST00000590887 TBC1D3DA0A087WVF3 549 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 TBC1D3IA0A087WXS9 549 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 TBC1D3EA0A087X179 549 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 TBC1D3KA0A087X1G2 549 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 A0A1W2PQF6 199 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 TBC1D3FA6NER0 549 aaPredicted RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 TBC1D3LB9A6J9 549 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 NPHS1O60500 1241 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 KERAO60938 352 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 ADAM23O75077 832 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 NIPSNAP2O75323 286 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 TBC1D3HP0C7X1 549 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 BMP1P13497 986 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 KCNA4P22459 653 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 NUDT1P36639 197 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 SLC1A6P48664 564 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 CLCN7P51798 805 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 STARD6P59095 220 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 ABCE1P61221 599 aaKnown RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 TMEM115Q12893 351 aaPredicted RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 PCLAFQ15004 111 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 TBC1D3GQ6DHY5 549 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 TBC1D3CQ6IPX1 549 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 KIAA1211LQ6NV74 962 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 KIAA1324Q6UXG2 1013 aaKnown RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 ADAMTSL4Q6UY14 1074 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 NEK10Q6ZWH5 1172 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 FRA10AC1Q70Z53 315 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 ZNF771Q7L3S4 317 aaPredicted RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 SYT13Q7L8C5 426 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 PIWIL4Q7Z3Z4 852 aaKnown RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 ISCA2Q86U28 154 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 C10orf107Q8IVU9 208 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 TBC1D3Q8IZP1 549 aaPredicted RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 PGBD3Q8N328 593 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 SIDT2Q8NBJ9 832 aaKnown RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 CD200R1Q8TD46 325 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 FAM131CQ96AQ9 280 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 LINGO1Q96FE5 620 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 HIC2Q96JB3 615 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 CNDP1Q96KN2 507 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 GPR78Q96P69 363 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 ELAC2Q9BQ52 826 aaKnown RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 CCM2Q9BSQ5 444 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 TRMOQ9BU70 441 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 FAM126AQ9BYI3 521 aaPredicted RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 BTBD1Q9H0C5 482 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 LMAN1LQ9HAT1 526 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 PHPT1Q9NRX4 125 aaPredicted RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 FGFR1OP2Q9NVK5 253 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 ZNF358Q9NW07 568 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 CPSF2Q9P2I0 782 aaKnown RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 GPR34Q9UPC5 381 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 ITM2BQ9Y287 266 aa12.82□□□□□ -0.36
PTBP1-216ENST00000590887 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 DNMT3AQ9Y6K1 912 aaPredicted RBP12.82□□□□□ -0.36
PTBP1-216ENST00000590887 TCRBV21S2A2A0A5A6 115 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 KANSL1LA0AUZ9 987 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 IGLON5A6NGN9 336 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 SLCO1B7G3V0H7 640 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 G3V2L1 256 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 RAD51BO15315 384 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 KCNJ13O60928 360 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 RNGTTO60942 597 aaKnown RBP12.81□□□□□ -0.36
PTBP1-216ENST00000590887 DNAJC6O75061 913 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 IPO13O94829 963 aaKnown RBP12.81□□□□□ -0.36
PTBP1-216ENST00000590887 CDK14O94921 469 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 HSPA4LO95757 839 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 C8GP07360 202 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 HIST1H2AGP0C0S8 130 aaPredicted RBP12.81□□□□□ -0.36
PTBP1-216ENST00000590887 MPC1LP0DKB6 136 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 HIST1H2ADP20671 130 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 BST1Q10588 318 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 SYTL3Q4VX76 610 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 PNCKQ6P2M8 343 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 RFLNAQ6ZTI6 216 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 FAM47EQ6ZV65 393 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 SPATA21Q7Z572 469 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 PIM3Q86V86 326 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 HORMAD1Q86X24 394 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 ANKRD49Q8WVL7 239 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 HIST1H2AHQ96KK5 128 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 FOPNLQ96NB1 174 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 HIST1H2AJQ99878 128 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 IER2Q9BTL4 223 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 H2AFJQ9BTM1 129 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 BOCQ9BWV1 1114 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 SLC17A9Q9BYT1 436 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 OSBPL6Q9BZF3 934 aa12.81□□□□□ -0.36
PTBP1-216ENST00000590887 MKRN2Q9H000 416 aaKnown RBP12.81□□□□□ -0.36
PTBP1-216ENST00000590887 ILKAPQ9H0C8 392 aaPredicted RBP12.81□□□□□ -0.36
PTBP1-216ENST00000590887 C12orf65Q9H3J6 166 aaKnown RBP12.81□□□□□ -0.36
PTBP1-216ENST00000590887 ALG9Q9H6U8 611 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms