RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 POU6F1Q14863 301 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 OASLQ15646 514 aaKnown RBP11.89□□□□□ -0.51
TPM4-212ENST00000590180 CCNG2Q16589 344 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 CLPPQ16740 277 aaPredicted RBP11.89□□□□□ -0.51
TPM4-212ENST00000590180 LONRF2Q1L5Z9 754 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 SNAP47Q5SQN1 464 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 FNBP1LQ5T0N5 605 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.89□□□□□ -0.51
TPM4-212ENST00000590180 TMEM71Q6P5X7 295 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 PPP1R21Q6ZMI0 780 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 TAS2R42Q7RTR8 314 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 GSTA5Q7RTV2 222 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 LINC00523Q86TU6 105 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 SLITRK4Q8IW52 837 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 KLHDC8BQ8IXV7 354 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 DDHD1Q8NEL9 900 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 OR52K1Q8NGK4 314 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 NCSTNQ92542 709 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 RTP4Q96DX8 246 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 SGF29Q96ES7 293 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 DNAJC1Q96KC8 554 aaKnown RBP11.89□□□□□ -0.51
TPM4-212ENST00000590180 DPYSL5Q9BPU6 564 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 TLR10Q9BXR5 811 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 RAB6BQ9NRW1 208 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 SCHIP1Q9P0W5 487 aaPredicted RBP11.89□□□□□ -0.51
TPM4-212ENST00000590180 DRG1Q9Y295 367 aaKnown RBP11.89□□□□□ -0.51
TPM4-212ENST00000590180 DNMT3AQ9Y6K1 912 aaPredicted RBP11.89□□□□□ -0.51
TPM4-212ENST00000590180 SLC30A1Q9Y6M5 507 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 FAM208BQ5VWN6 2430 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 AHCTF1Q8WYP5 2266 aa11.89□□□□□ -0.51
TPM4-212ENST00000590180 ASPMQ8IZT6 3477 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 DSPP15924 2871 aaKnown RBP11.88□□□□□ -0.51
TPM4-212ENST00000590180 IGHV5-10-1A0A0J9YXX1 117 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 CCDC78A2IDD5 438 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 A6NCN8 305 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 A8MU76 341 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 LDB2O43679 373 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 DUX1O43812 170 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 ZSCAN5DPP0CG00 497 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 RALBP11234 206 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 XRCC1P18887 633 aaPredicted RBP11.88□□□□□ -0.51
TPM4-212ENST00000590180 ITIH1P19827 911 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 ITGALP20701 1170 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 MC4RP32245 332 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 SLC19A1P41440 591 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 MLLT3P42568 568 aaPredicted RBP11.88□□□□□ -0.51
TPM4-212ENST00000590180 ZNF140P52738 457 aaPredicted RBP11.88□□□□□ -0.51
TPM4-212ENST00000590180 LIMK2P53671 638 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 XIAPP98170 497 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 CFHR1Q03591 330 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 SQSTM1Q13501 440 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 C16orf72Q14CZ0 275 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 ZRANB3Q5FWF4 1079 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 IGF2-ASQ6U949 168 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 ABRAXAS1Q6UWZ7 409 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 SNX20Q7Z614 316 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 C11orf96Q7Z7L8 435 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 BEND7Q8N7W2 519 aaPredicted RBP11.88□□□□□ -0.51
TPM4-212ENST00000590180 AVL9Q8NBF6 648 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 RCBTB1Q8NDN9 531 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 OR4D9Q8NGE8 314 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 NAT14Q8WUY8 206 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 KCNE4Q8WWG9 221 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 ANP32BQ92688 251 aaKnown RBP11.88□□□□□ -0.51
TPM4-212ENST00000590180 TMEM159Q96B96 161 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 ULK4Q96C45 1275 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 CXorf40BQ96DE9 158 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 CCDC74BQ96LY2 380 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 TBC1D10AQ9BXI6 508 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 SMOXQ9NWM0 555 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.88□□□□□ -0.51
TPM4-212ENST00000590180 PAK5Q9P286 719 aa11.88□□□□□ -0.51
TPM4-212ENST00000590180 ZNF624Q9P2J8 865 aaPredicted RBP11.88□□□□□ -0.51
TPM4-212ENST00000590180 ZFC3H1O60293 1989 aaKnown RBP11.87□□□□□ -0.51
TPM4-212ENST00000590180 OR52A4PA6NMU1 304 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 ERI2A8K979 691 aaKnown RBP11.87□□□□□ -0.51
TPM4-212ENST00000590180 CFAP99D6REC4 459 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 KLK10O43240 276 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 ITGA2BP08514 1039 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 TYRP1P17643 537 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 AMD1P17707 334 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 SLC5A2P31639 672 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 CSTF2P33240 577 aaKnown RBP eCLIP11.87□□□□□ -0.51
TPM4-212ENST00000590180 RPL22P35268 128 aaKnown RBP11.87□□□□□ -0.51
TPM4-212ENST00000590180 HALP42357 657 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 KCNJ1P48048 391 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 UBE2IP63279 158 aaKnown RBP11.87□□□□□ -0.51
TPM4-212ENST00000590180 CDH17Q12864 832 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 TRA2AQ13595 282 aaKnown RBP eCLIP11.87□□□□□ -0.51
TPM4-212ENST00000590180 CLCA4Q14CN2 919 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 SKIDA1Q1XH10 827 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 GPR33Q49SQ1 333 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 CCDC38Q502W7 563 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 BROXQ5VW32 411 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 WASH2PQ6VEQ5 465 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 SPACA3Q8IXA5 215 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 STYXQ8WUJ0 223 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 USP7Q93009 1102 aa11.87□□□□□ -0.51
TPM4-212ENST00000590180 CCDC97Q96F63 343 aaPredicted RBP11.87□□□□□ -0.51
TPM4-212ENST00000590180 CDKN2AIPNLQ96HQ2 116 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms