RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SSU72P8A0A1W2PR75 194 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 EIF3CLB5ME19 914 aaKnown RBP12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 CHUKO15111 745 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 LRRTM2O43300 516 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 PRPSAP2O60256 369 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 CPNE3O75131 537 aaKnown RBP12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 LCA5LO95447 670 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 ZNF7P17097 686 aaPredicted RBP12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 NIPAL4Q0D2K0 466 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 NFKBIBQ15653 356 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 RALGPS1Q5JS13 557 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 PLEKHS1Q5SXH7 462 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 IZUMO3Q5VZ72 239 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 SP5Q6BEB4 398 aaPredicted RBP12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 ACAD10Q6JQN1 1059 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 TMCO3Q6UWJ1 677 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 POLNQ7Z5Q5 900 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 ZC3H18Q86VM9 953 aaKnown RBP12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 TMEM126BQ8IUX1 230 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 TMEM151BQ8IW70 566 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 SLC34A3Q8N130 599 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 TEX26Q8N6G2 289 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 GLIS1Q8NBF1 620 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 AVL9Q8NBF6 648 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 GPR26Q8NDV2 337 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 ARRDC2Q8TBH0 407 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 ZNF653Q96CK0 615 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 CSPG4P5Q96PW8 444 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 EIF3CQ99613 913 aaKnown RBP12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 BARD1Q99728 777 aaKnown RBP12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 WASH6PQ9NQA3 447 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 POT1Q9NUX5 634 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 TCFL5Q9UL49 500 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 SNX7Q9UNH6 387 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 ENTPD4Q9Y227 616 aa12.51□□□□□ -0.41
PRKCSH-210ENST00000589990 TMEM191CA6NGB0 347 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 ZG16O60844 167 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 MTA2O94776 668 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 SLC25A14O95258 325 aaPredicted RBP12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 VAV2P52735 878 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 FOXL2P58012 376 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 ABRQ12979 859 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 KYNUQ16719 465 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 QPCTQ16769 361 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 PLEKHA7Q6IQ23 1121 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 FAM198BQ6UWH4 519 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 ABRAXAS1Q6UWZ7 409 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 CUZD1Q86UP6 607 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 BBS5Q8N3I7 341 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 UBXN4Q92575 508 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 ZNF501Q96CX3 271 aaPredicted RBP12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 CXorf40BQ96DE9 158 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 MOCOSQ96EN8 888 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 FCRL4Q96PJ5 515 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 LYSMD1Q96S90 227 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 RAB33BQ9H082 229 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 TMPRSS11EQ9UL52 423 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 B3GNT3Q9Y2A9 372 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 TTLL3Q9Y4R7 772 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 CSAG2Q9Y5P2 127 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 CCDC88CQ9P219 2028 aa12.5□□□□□ -0.41
PRKCSH-210ENST00000589990 SVILO95425 2214 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 MED13LQ71F56 2210 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 FER1L5A0AVI2 2057 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 H3BRJ5 948 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 MEN1O00255 615 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 JCHAINP01591 159 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 PIRTP0C851 137 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 VARSP26640 1264 aaKnown RBP12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 ARCN1P48444 511 aaKnown RBP12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 CDH6P55285 790 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 PDE1BQ01064 536 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 ACY1Q03154 408 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 ELOAQ14241 798 aaKnown RBP12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 KRT31Q15323 416 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 LLGL1Q15334 1064 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 ZRSR2Q15696 482 aaKnown RBP12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 DPYSL2Q16555 572 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 PTCHD3Q3KNS1 767 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 ANO6Q4KMQ2 910 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 HGSNATQ68CP4 663 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 RBM43Q6ZSC3 357 aaKnown RBP12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 C11orf96Q7Z7L8 435 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 DSELQ8IZU8 1212 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 NDUFAF2Q8N183 169 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 D2HGDHQ8N465 521 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 UBE2Q2Q8WVN8 375 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 HSPH1Q92598 858 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 SYT11Q9BT88 431 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 SPATA16Q9BXB7 569 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 POLR1EQ9GZS1 481 aaKnown RBP12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 ZWILCHQ9H900 591 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 PCDH9Q9HC56 1237 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 TRIM39Q9HCM9 518 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 PKD2L2Q9NZM6 624 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 OSGIN2Q9Y236 505 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 COPG1Q9Y678 874 aaKnown RBP12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 ZGRF1Q86YA3 2104 aa12.49□□□□□ -0.41
PRKCSH-210ENST00000589990 PRSS44E7EML9 344 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 E2F3O00716 465 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms